Table 1.
ACICU locus taga | Predicted functionb | Motif identified (5′ → 3′) | Distance between motif and TSS (Bp) |
---|---|---|---|
ACICU_03004–ACICU_03002 | PmrC, PmrA, PmrB | TTTAAG N5 TTTAAG | 48 |
ACICU_03001 | Putative lipid A 4′-phosphatase (LpxF-like) | ATTAAA N3 ATTAAA | 103 |
ACICU_01072 | Putative lipid A pEtN transferase | TTTAAT N6 ATTAAT | 79 |
ACICU_02907 | Diacylglycerol kinase | TTTAAT N5 TTTAAG | 44 |
TTTAAA N5 TTTAAT | 55 | ||
ACICU_02865–ACICU_02868 | Hypothetical glycosyl transferase family 2 | TTTAAG N5 ATTAAG | 85 |
CTTAAG N5 TTTAAG | 96 | ||
ACICU_00900–ACICU_00902 | PgaD, PgaC, PgaB | CTTAAG N0 TTTAAA | 41 |
CTTAAG N5 AATAAA | 67 | ||
TTTAAA N2 TTTAAG | 148 | ||
ACICU_02895 | Putative polyketide synthase modules | TTTAAG N4 CTTAAT | 92 |
TTTAAT N5 TTTAAG | 102 | ||
ACICU_03041 | SbmA | TTTAAA N3 ATTAAA | 227 |
ACICU_01552–ACICU_01551 | Hypothetical proteins | TTTAAG N1 TTTAAT | 51 |
TTTAAG N5 TTTAAG | 58 | ||
ACICU_01518 | Hypothetical protein | CTTAAA N5 ATTAAA | 126 |
ACICU_00741 | Uncharacterized (COG3216) | TTTAAG N2 TTTAAT | 60 |
TTTAAT N1 TTTAAG | 68 |