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. 2021 Sep 28;170(6):787–800. doi: 10.1093/jb/mvab102

Table 1.

Putative A. baumannii PmrA Regulon

ACICU locus taga Predicted functionb Motif identified (5′ → 3′) Distance between motif and TSS (Bp)
ACICU_03004–ACICU_03002 PmrC, PmrA, PmrB TTTAAG N5  TTTAAG 48
ACICU_03001 Putative lipid A 4′-phosphatase (LpxF-like) ATTAAA N3  ATTAAA 103
ACICU_01072 Putative lipid A pEtN transferase TTTAAT N6  ATTAAT 79
ACICU_02907 Diacylglycerol kinase TTTAAT N5  TTTAAG 44
TTTAAA N5  TTTAAT 55
ACICU_02865–ACICU_02868 Hypothetical glycosyl transferase family 2 TTTAAG N5  ATTAAG 85
CTTAAG N5  TTTAAG 96
ACICU_00900–ACICU_00902 PgaD, PgaC, PgaB CTTAAG N0  TTTAAA 41
CTTAAG N5  AATAAA 67
TTTAAA N2  TTTAAG 148
ACICU_02895 Putative polyketide synthase modules TTTAAG N4  CTTAAT 92
TTTAAT N5  TTTAAG 102
ACICU_03041 SbmA TTTAAA N3  ATTAAA 227
ACICU_01552–ACICU_01551 Hypothetical proteins TTTAAG N1  TTTAAT 51
TTTAAG N5  TTTAAG 58
ACICU_01518 Hypothetical protein CTTAAA N5  ATTAAA 126
ACICU_00741 Uncharacterized (COG3216) TTTAAG N2  TTTAAT 60
TTTAAT N1  TTTAAG 68

TSS = Translational Start Site

a

Selected from transcriptome study (22).

b

Referenced from ACICU genome (48).