. Author manuscript; available in PMC: 2022 Jan 12.

Published in final edited form as: Biom J. 2019 Sep 4;62(1):191–201. doi: 10.1002/bimj.201900050

Table 3.

Summary of the analysis of the Colorectal cancer data. Presented results include the chromosome number (Chr) and coordinate (Coordinate) of the identified SNPs, the gene they lie on (Gene), reference allele (Ref), minor allele frequency (MAF), and estimated effect (Estimate).

Description	Chr	Coordinate	Gene	Ref	MAF	Estimate
Intercept						0.90
Gender						0.00
Age						−3.75
BMI						0.00
Smoking						1.32
S ₃	3	57086348	ARHGEF3	G	0.07	2.40
S ₁₉	16	81947156	PLCG2	C	0.08	0.85
S ₂₇	10	129963848	intergenic	C	0.34	−1.32
S ₅₁	5	98125016	RGMB	G	0.05	1.95
S ₅₈	18	59822981	PIGN	TC	0.19	−1.39
S ₁₁₈	5	164113078	intergenic	T	0.12	1.65
S ₁₂₈	6	77328692	intergenic	A	0.04	1.22
S ₁₅₄	17	45800299	intergenic	T	0.36	1.32
S ₁₇₂	16	13018917	SHISA9	C	0.11	1.67
S ₂₀₀	3	12816282	intergenic	A	0.03	2.13