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. 2022 Jan 13;142:105228. doi: 10.1016/j.compbiomed.2022.105228

Table 5.

Lipinski properties of the two screened peptides and two FDA-approved protease inhibitors including Ritonavir and Lopinavir as control compounds.

Compound Decoy peptides in SMILES format Lipinski properties
2ERW-9 CC(C)C(NC(=O)C(CC1=CC=C(O)C=C1)NC(=O)C(CC(N) = O)NC(=O)C(CCC[NH+] = C(N)N)NC(=O)C(CC2=CC=CC=C2)NC(=O)C(CS)NC(=O)C(C)NC(=O)C(CS)NC(=O)C3CCCN3C(=O)C([NH3+])CC(N) = O)C([O-]) = O Molecular weight: 1187.39
ALog P: 3.31
H-bond donor: 17 9
H-bond acceptor: 16 11
Molar refractivity: 304.73 195.54
Topological Polar Surface Area: 570.9220.14
Number of rotatable bonds: 33 16
1KJ0-7 NC(N) = [NH+]CCCC([NH3+])C(=O)NC(CCCC[NH3+])C(=O)NCC(=O)NC(CS)C(=O)N1CCCC1C(=O)N2CCCC2C(=O)NC(CC3=C[NH]C=N3)C([O-]) = O Molecular weight: 795.97
ALog P: 5.82
H-bond donor: 11 8
H-bond acceptor: 10 6
Molar refractivity: 210.22
Topological Polar Surface Area: 385.92 169.15
Number of rotatable bonds: 22 11
Lopinavir CC(C)C(N1CCCNC1 = O)C(=O)NC(CC(O)C(CC2=CC=CC=C2)NC(=O)COC3=C(C)C=CC=C3C)CC4=CC=CC=C4 Molecular weight: 628.81
ALog P: 4.33
H-bond donor: 5
H-bond acceptor: 4
Molar refractivity: 187.92
Topological Polar Surface Area: 120
Number of rotatable bonds: 15
Ritonavir CC(C)C(NC(=O)N(C)CC1=CSC(=N1)C(C)C)C(=O)NC(CC(O)C(CC2=CC=CC=C2)NC(=O)OCC3=CN=CS3)CC4=CC=CC=C4 Molecular weight: 720.94
ALog P: 5.91
H-bond donor: 9
H-bond acceptor: 4
Molar refractivity:197.82
Topological Polar Surface Area: 202.26
Number of rotatable bonds: 17