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. 2022 Jan 15;26(5):2659–2678. doi: 10.1007/s11030-021-10359-4

Table 3.

Number and occupancy frequencies of hydrogen bonds of the top four hit compounds and the control compound iST2-1 calculated using the data of the last 50 ns of 100 ns simulations trajectories

Compound Number of hydrogen bonds formed in each frame Donor Acceptor Occupancy (%)
ZINC08911140 3.09 ± 1.12 ARG198-Side-NH1 LIG209-Side-O4 93.2
LYS127-Side-NZ LIG209-Main-O 49
LYS127-Side-NZ LIG209-Side-O4 44.3
ARG198-Side-NH2 LIG209-Side-O4 38
ARG198-Side-NH2 LIG209-Main-O 36.4
LYS130-Side-NZ LIG209-Side-O1 19.7
ARG198-Side-NH1 LIG209-Main-O 16.9
ZINC16933127 4.63 ± 1.36 ARG38-Side-NH1 LIG209-Side-O4 80.4
ARG38-Side-NH1 LIG209-Side-O1 72
ARG38-Side-NE LIG209-Side-O4 66.1
GLN39-Main-N LIG209-Side-O6 53.9
LIG209-Side-O5 GLN23-Main-O 39.8
ARG38-Side-NE LIG209-Side-O1 38.5
ARG96-Side-NH2 LIG209-Side-O4 19.4
LYS22-Side-NZ LIG209-Side-O3 17.2
LYS22-Side-NZ LIG209-Main-O 16
GLN39-Main-N LIG209-Side-O2 14.2
ARG96-Side-NH2 LIG209-Side-O1 11.7
ZINC40658091 4.15 ± 1.38 LIG209-Side-N2 SER21-Main-O 93.3
LYS22-Side-NZ LIG209-Side-O4 50.4
LYS22-Side-NZ LIG209-Main-O 46
ARG38-Main-N LIG209-Main-O 43.6
ARG38-Main-N LIG209-Side-O4 34.8
ARG35-Side-NH1 LIG209-Side-O4 27.3
ARG35-Side-NH1 LIG209-Main-O 24.8
ARG35-Side-NE LIG209-Side-O4 21.2
ARG35-Side-NH2 LIG209-Side-O4 13.2
ZINC59514725 4.46 ± 1.03 LYS22-Side-NZ LIG209-Side-O5 96.5
ARG35-Side-NE LIG209-Side-O5 89.9
ARG38-Side-NH1 LIG209-Main-O 59.8
ARG38-Side-NE LIG209-Main-O 55.1
ARG38-Side-NH1 LIG209-Side-O4 43.1
ARG38-Side-NE LIG209-Side-O4 38.3
ARG96-Side-NH2 LIG209-Main-O 12
ARG96-Side-NH2 LIG209-Side-O4 11.2
iST2-1 (pose 2) 0.40 ± 0.72 THR86-Main-N LIG209-Side-O2 10.3

Only interactions with a frequency greater than 10% are presented

The key residues are shown in bold