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. 2022 Jan 11;3(1):101083. doi: 10.1016/j.xpro.2021.101083
REAGENT or RESOURCE SOURCE IDENTIFIER
Deposited data

Original data used to create Figure 4C in Yao et al. (2021) Yao et al. (2021) https://ars.els-cdn.com/content/image/1-s2.0-S2589004221007537-mmc2.xlsx
PGC Schizophrenia wave 3 GWAS 2021 The Schizophrenia Working Group of the Psychiatric Genomics Consortium et al. (2020) https://doi.org/10.6084/m9.figshare.14672178
Instruction on obtaining and making the GRCh37/hg19 or GRCh38/hg38 version of 1000G EUR plink file set (SNP_Loc_File) This article https://github.com/endeneon/MAGMA_analysis_protocol/tree/main/g1k_eur_hg38
Revised gene location file (in GRCh37/hg19) containing gene symbols as IDs (Gene_Loc_File), This article https://github.com/endeneon/MAGMA_analysis_protocol/blob/main/data_files/Rev.NCBI37.3.gene.loc

Software and algorithms

MAGMA software, gene location, and GRCh37/hg19 plink population file sets https://ctg.cncr.nl/software/magma
H-MAGMA codes and annotation files https://github.com/thewonlab/H-MAGMA
Miniconda https://docs.conda.io/en/latest/miniconda.html