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. 2022 Jan 3;12:799378. doi: 10.3389/fmicb.2021.799378

Table 1.

Sequencing data quality for the analyzed soil rasters during spring, summer, and autumn expressed by input – number of reads in raw fastq files; filtered – number of reads after preliminary quality filtering; denoised (F/R) – number of reads after quality filtering; merged – number of merged forward-reverse reads; nonchim – number of merged reads after removal of chimera sequences; and %passed – relative number of passed reads after all the above steps.

Number of raster Input Filtered Denoised F Denoised R Merged Nonchim % Passed
Spring
K20-144 127,745 102,019 98,558 98,419 86,870 86,803 68
K20-145 132,046 106,424 101,868 102,033 89,142 89,056 67
K20-146 131,436 106,621 101,664 101,177 86,716 86,646 66
K20-147 147,153 118,482 114,357 114,030 98,093 97,672 66
K20-148 185,209 156,578 153,548 153,309 140,808 140,469 76
K21-149 131,033 107,968 104,682 104,541 93,432 93,180 71
K21-151 129,029 99,820 95,737 94,143 83,119 82,294 64
K21-152 147,218 116,555 112,077 112,311 97,340 97,266 66
K21-154 189,573 139,379 136,018 136,225 123,920 123,770 65
K21-155 111,334 87,121 81,347 81,058 70,957 70,874 64
Summer
K20-144 84,692 70,282 63,154 61,799 55,534 55,500 66
K20-145 91,288 76,905 71,716 70,587 62,001 61,953 68
K20-146 88,795 69,818 66,409 65,471 56,977 56,851 64
K20-147 68,166 52,584 48,058 47,263 36,145 36,110 53
K20-148 71,012 53,036 50,453 49,549 39,410 39,356 55
K21-149 137,096 119,501 116,669 116,577 105,319 105,169 77
K21-151 73,651 55,156 53,156 52,577 45,428 45,392 62
K21-152 5,121 33,469 30,271 29,297 19,709 19,705 38
K21-154 84,759 49,147 45,890 44,479 32,163 32,134 38
Autumn
K20-144 200,759 159,635 150,244 150,499 125,878 125,656 63
K20-145 226,430 180,875 173,614 172,965 149,672 149,173 66
K20-146 233,657 192,772 181,205 174,897 154,944 154,721 66
K20-147 201,315 156,308 149,113 148,272 119,050 118,950 59
K20-148 130,977 92,641 87,921 87,737 71,036 70,966 54
K21-149 147,615 114,984 112,588 109,578 95,254 95,214 65
K21-151 190,379 150,684 142,219 142,190 119,435 118,863 62
K21-152 230,280 184,585 180,579 180,508 162,439 162,281 70
K21-154 168,259 131,411 126,447 126,038 106,047 105,882 63
K21-155 178,502 142,230 136,210 135,898 110,217 110,042 62