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. 2021 Nov 8;18(1):45–56. doi: 10.1039/d1mo00254f

Summary of all FgLy6s identified by BLAST similarity to known F. hepatica and S. mansoni sequences (at E < 1 × 10−5) and presence of uPAR-domain features. FgLy6s were identified across three databases (NEJ transcriptome, adult transcriptome and F. gigantica genome). Signal peptides were predicted using Signal P 5.0. Transmembrane domains were predicted using TmPred. Protein sequence data corresponding with the NEJ transcript IDs are also available in Supplementary Data.

Ly6 GenBank accession Sequence length (amino acids) Signal peptide C-terminal transmembrane domain NEJ F. gigantica transcript ID. Transcriptomic support in adult F. gigantica. F. gigantica genomic support. F. hepatica orthologue identified. Δ
A TPP67930 127 + + 01777 + + +b
B TPP57504 122 + + 05428 + +
C TPP61687 132 + + 04026 + +b
D TPP58533 121 + + 11947 + + +ab
E 109 + 11274 −*
F TPP58767 122 + + 05429 + +b
G TPP66235 122 + + 11065 + +b
H TPP66236 120 + + 14360 + +b
I TPP67438 150 + + 10885 + + +ab
J TPP56171 143 + + 10181 + + +ab
K TPP58682 152 + + 11200 + + +ab
L TPP59839 138 + + 01142 + + +ab
M TPP61345 153 + + 09765 + + +ab
N 117 + + 02813 + + +ab
O TPP67399 189 + + 06228 + + +ab
P TPP57978 127 + 02241 + +
Q TPP67483 129 + + + + +b
R TPP67398 197 + + + + −*
S TPP57976 166 + + +a
T TPP67484 121 + + + −*