Skip to main content
. 2022 Jan 17;5:60. doi: 10.1038/s42003-022-03022-7

Fig. 2. IBD-based recombination pattern in the 550 MAGIC RILs across the genome.

Fig. 2

a The recombination pattern along the cotton chromosomes (top). Each estimated point indicates the mean value of recombination jointly in a 1-Mb sliding window across the 550 MAGIC RILs. IBD map for 11 founder parents (bottom). Each IBD block is assigned to the parent with the top probability, only if it is larger than 2 folds of expected value by chance (1/11), otherwise, it was considered with an unknown origin (in white). b Density plots of the length of IBD blocks in the At and Dt subgenomes. c Violin plots of IBD number of 550 MAGIC RILs in At and Dt subgenomes. P-value was calculated by a two-tailed Student’s t-test. d Global contribution of 11 parents in the MAGIC population.