TABLE 1.
Selected human GPCRs and their QTY-designed variants
UniProt accession no.a |
Wild typeb |
QTY designedb |
RACTc | RSCd | ||||
---|---|---|---|---|---|---|---|---|
MW (kDa) | pI | HY | MW (kDa) | pI | HY | |||
P41595 | 54.30 | 9.22 | 0.2672 | 54.76 | 9.10 | −0.7305 | 0.5484 | 0.0291 |
P29274 | 44.71 | 8.33 | 0.4607 | 45.15 | 8.29 | −0.7072 | 0.5060 | 0.1068 |
P07550 | 46.46 | 6.59 | 0.1700 | 46.65 | 6.59 | −0.8764 | 0.4731 | 0.0630 |
P51681 | 40.52 | 9.20 | 0.5466 | 41.05 | 9.07 | −0.9218 | 0.5576 | 0.0483 |
P61073 | 39.75 | 8.46 | 0.3994 | 40.05 | 8.40 | −0.9113 | 0.5608 | 0.0568 |
P35462 | 44.22 | 9.20 | 0.3190 | 44.71 | 9.12 | −0.7351 | 0.4902 | 0.0750 |
P41143 | 40.37 | 9.20 | 0.5384 | 40.75 | 9.11 | −0.6878 | 0.4629 | 0.0538 |
P47871 | 51.26 | 9.01 | 0.0785 | 51.93 | 8.90 | −0.9388 | 0.5094 | 0.0929 |
P35367 | 55.78 | 9.33 | −0.0859 | 56.20 | 9.24 | −0.9675 | 0.5067 | 0.0924 |
P41145 | 42.65 | 7.92 | 0.4816 | 42.85 | 7.88 | −0.7465 | 0.5241 | 0.0500 |
P41146 | 40.69 | 8.73 | 0.6511 | 41.14 | 8.67 | −0.4883 | 0.4720 | 0.0243 |
Q9H244 | 39.44 | 9.59 | 0.3512 | 39.85 | 9.38 | −0.9786 | 0.5490 | 0.0263 |
P21453 | 42.81 | 9.58 | 0.4408 | 43.38 | 9.44 | −0.9009 | 0.5506 | 0.0314 |
P28222 | 43.57 | 8.95 | 0.3421 | 43.99 | 8.88 | −0.8378 | 0.4938 | 0.0590 |
Q99835 | 83.68 | 8.70 | −0.0599 | 84.17 | 8.66 | −0.5953 | 0.5102 | 0.1329 |
All 15 selected GPCRs have been well investigated in previous research, and their related structure data can be retrieved from the PDB.
MW, pI, and HY indicate molecular weight in kilodaltons, isoelectric point, and hydrophobicity, respectively, which were calculated using ProPAS (8).
RACT estimates the changing rate of amino acid sequence in TM regions, calculated by dividing the numbers of changed amino acids by the summarized length of all the TM regions.
RSC shows the changing rate of secondary structure, which was calculated by dividing the number of positions related to structure changing by the whole length of the protein sequence.