Table 1. Clam specimens and tissues sequenced with Illumina paired-ends.
Sixteen specimens (eight neoplastic and eight non-neoplastic) from three different clam species (V. verrucosa, C. gallina, and C. striatula) were sequenced with Illumina paired-ends. Columns 5 and 6 show the number of reads generated for the host tissue (when neoplastic, matched-normal tissue was foot) and the tumoural haemolymph, respectively. (*) denotes the only available tissue from this neoplastic animal, collected in 2011, were gills. (#) denotes hemic neoplasia stage was not determined because cytohistological examination was not possible in this individual, which was diagnosed by cytogenetics.
| Clam species | Specimen origin | Specimen code | Diagnosis | Foot reads | Haemolymph reads |
|---|---|---|---|---|---|
| V. verrucosa | Galicia, Spain | ERVV17-2995 | N3 | 833 M | 919 M |
| V. verrucosa | Galicia, Spain | ERVV17-2997 | N1 | 766 M | 598 M |
| V. verrucosa | Galicia, Spain | ERVV17-3193 | N3 | 739 M | 850 M |
| V. verrucosa | Balearic Islands, Spain | EMVV18-376 | N1 | 784 M | 849 M |
| V. verrucosa | Balearic Islands, Spain | EMVV18-391 | N3 | 617 M | 623 M |
| V. verrucosa | Balearic Islands, Spain | EMVV18-395 | N3 | 697 M | 679 M |
| V. verrucosa | Balearic Islands, Spain | EMVV18-400 | N1 | 782 M | 1133 M |
| V. verrucosa | Galicia, Spain | EVVV11-02 | N# | 743 M* | –* |
| V. verrucosa | Split, Croatia | CSVV18-1052 | Healthy | 161 M | – |
| V. verrucosa | Balearic Islands, Spain | EMVV18-385 | Healthy | 143 M | – |
| V. verrucosa | Granville, France | FGVV18-183 | Healthy | 752 M | – |
| V. verrucosa | Carna, Ireland | IGVV19-666 | Healthy | 155 M | – |
| V. verrucosa | Oeiras, Portugal | PLVV18-2249 | Healthy | 163 M | – |
| C. gallina | S.Benedetto, Italy | IMCG15-69 | Healthy | 147 M | – |
| C. gallina | Cadiz, Spain | ECCG15-201 | Healthy | 752 M | – |
| C. striatula | Galicia, Spain | EVCS14-09 | Healthy | 706 M | – |