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. 2022 Jan 18;11:e66946. doi: 10.7554/eLife.66946

Table 1. Clam specimens and tissues sequenced with Illumina paired-ends.

Sixteen specimens (eight neoplastic and eight non-neoplastic) from three different clam species (V. verrucosa, C. gallina, and C. striatula) were sequenced with Illumina paired-ends. Columns 5 and 6 show the number of reads generated for the host tissue (when neoplastic, matched-normal tissue was foot) and the tumoural haemolymph, respectively. (*) denotes the only available tissue from this neoplastic animal, collected in 2011, were gills. (#) denotes hemic neoplasia stage was not determined because cytohistological examination was not possible in this individual, which was diagnosed by cytogenetics.

Clam species Specimen origin Specimen code Diagnosis Foot reads Haemolymph reads
V. verrucosa Galicia, Spain ERVV17-2995 N3 833 M 919 M
V. verrucosa Galicia, Spain ERVV17-2997 N1 766 M 598 M
V. verrucosa Galicia, Spain ERVV17-3193 N3 739 M 850 M
V. verrucosa Balearic Islands, Spain EMVV18-376 N1 784 M 849 M
V. verrucosa Balearic Islands, Spain EMVV18-391 N3 617 M 623 M
V. verrucosa Balearic Islands, Spain EMVV18-395 N3 697 M 679 M
V. verrucosa Balearic Islands, Spain EMVV18-400 N1 782 M 1133 M
V. verrucosa Galicia, Spain EVVV11-02 N# 743 M* –*
V. verrucosa Split, Croatia CSVV18-1052 Healthy 161 M
V. verrucosa Balearic Islands, Spain EMVV18-385 Healthy 143 M
V. verrucosa Granville, France FGVV18-183 Healthy 752 M
V. verrucosa Carna, Ireland IGVV19-666 Healthy 155 M
V. verrucosa Oeiras, Portugal PLVV18-2249 Healthy 163 M
C. gallina S.Benedetto, Italy IMCG15-69 Healthy 147 M
C. gallina Cadiz, Spain ECCG15-201 Healthy 752 M
C. striatula Galicia, Spain EVCS14-09 Healthy 706 M