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. 2001 Jan;39(1):14–23. doi: 10.1128/JCM.39.1.14-23.2001

TABLE 1.

Oligonucleotide primers for Campylobacter MLST

Locus Dideoxyoligonucleotide primer
Amplicon size (bp)
Function Name and sequence
Forward Reverse
asp Amplification asp-A9, 5′-AGT ACT AAT GAT GCT TAT CC-3′ asp-A10, 5′-ATT TCA TCA ATT TGT TCT TTG C-3′ 899
Sequencing asp-S3, 5′-CCA ACT GCA AGA TGC TGT ACC-3′ asp-S6, 5′-TTA ATT TGC GGT AAT ACC ATC-3′
gln Amplification gln-A1, 5′-TAG GAA CTT GGC ATC ATA TTA CC-3′ gln-A2, 5′-TTG GAC GAG CTT CTA CTG GC-3′ 1,262
Sequencing gln-S3, 5′-CAT GCA ATC AAT GAA GAA AC-3′ gln-S6, 5′-TTC CAT AAG CTC ATA TGA AC-3′
glt Amplification glt-A1, 5′-GGG CTT GAC TTC TAC AGC TAC TTG-3′ glt-A2, 5′-CCA AAT AAA GTT GTC TTG GAC GG-3′ 1,012
Sequencing glt-S1, 5′-GTG GCT ATC CTA TAG AGT GGC-3′ glt-S6, 5′-CCA AAG CGC ACC AAT ACC TG-3′
gly Amplification gly-A1, 5′-GAG TTA GAG CGT CAA TGT GAA GG-3′ gly-A2, 5′-AAA CCT CTG GCA GTA AGG GC-3′ 816
Sequencing gly-S3, 5′-AGC TAA TCA AGG TGT TTA TGC GG-3′ gly-S4, 5′-AGG TGA TTA TCC GTT CCA TCG C-3′
pgm Amplification pgm-A7, 5′-TAC TAA TAA TAT CTT AGT AGG-3′ pgm-A8, 5′-CAC AAC ATT TTT CAT TTC TTT TTC-3′ 1,150
Sequencing pgm-S5, 5-GGT TTT AGA TGT GGC TCA TG-3′ pgm-S2, 3′-TCC AGA ATA GCG AAA TAA GG-3′
tkt Amplification tkt-A3, 5′-GCA AAC TCA GGA CAC CCA GG-3′ tkt-A6, 5′-AAA GCA TTG TTA ATG GCT GC-3′ 1,102
Sequencing tkt-S5, 5′-GCT TAG CAG ATA TTT TAA GTG-3′ tkt-S4, 5′-ACT TCT TCA CCC AAA GGT GCG-3′
unc Amplification unc-A7, 5′-ATG GAC TTA AGA ATA TTA TGG C-3′ unc-A2, 5′-GCT AAG CGG AGA ATA AGG TGG-3′ 1,120
Sequencing unc-S5, 5′-TGT TGC AAT TGG TCA AAA GC-3′ unc-S4, 5′-TGC CTC ATC TAA ATC ACT AGC-3′