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Mutations shared by the entire Apulian population. The types (one circle corresponding to one mutation type) and positions of the shared mutations are shown on the Costa Rican coffee strain genome, COF0407 (a). The names appearing outside the circle correspond to the names of COF0407 contigs (a). Functions of the proteins with mutations (SNPs or indels) encoded in the plasmid (b, n=54) and chromosome (c, n=63).
