TABLE 1. Scoring Values of Substrate Binding and New Ligand Binding With Mac1 Domain of SARS-CoV-2.
| Compounds | Docking Score (XP) kcal/mol | Docking Score (QPLD) kcal/mol | MM/GBSA energy (XP) kcal/mol | MM/GBSA Energy (QPLD) kcal/mol | RMSD (Å) |
|---|---|---|---|---|---|
| ADP-ribose | −7.21 | −7.49 | −42.38 | −51.31 | 0.058 |
| ZINC08765069 | −13.38 | −12.86 | −71.62 | −70.33 | 0.106 |
| ZINC08792474 | −12.89 | −13.20 | −86.35 | −85.55 | 0.092 |
| ZINC08879336 | −12.27 | −12.83 | −77.90 | −81.37 | 0.068 |
| ZINC08879971 | −11.82 | −11.88 | −68.52 | −70.30 | 0.061 |
| ZINC00897592 | −11.17 | −11.55 | −55.23 | −58.69 | 0.023 |