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. 2021 Dec 22;13(1):17. doi: 10.3390/genes13010017

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© 2021 by the authors.

Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).

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Manhattan plots of the percentage of the total additive genetic variance explained by non-clustered SNPs and haplotypes from haploblocks built with a linkage disequilibrium threshold of 0.80 for yearling temperament in American Angus cattle using single-step GWAS (ssGWAS_NCSNP_H0.80; A) and weighted single-step GWAS in the second (WssGWAS_2_NCSNP_H0.80; B) and third (WssGWAS_3_NCSNP_H0.80; C) iterations. Green points highlighted above the red horizontal line are the top 0.001% markers that explained greater percentages of the total additive genetic variance for YT. The X-chromosome (PAR region) is represented by the chromosome 30.

Manhattan plots of the percentage of the total additive genetic variance explained by non-clustered SNPs and haplotypes from haploblocks built with a linkage disequilibrium threshold of 0.80 for yearling temperament in American Angus cattle using single-step GWAS (ssGWAS_NCSNP_H0.80; A) and weighted single-step GWAS in the second (WssGWAS_2_NCSNP_H0.80; B) and third (WssGWAS_3_NCSNP_H0.80; C) iterations. Green points highlighted above the red horizontal line are the top 0.001% markers that explained greater percentages of the total additive genetic variance for YT. The X-chromosome (PAR region) is represented by the chromosome 30.