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. 2021 Dec 22;13(1):17. doi: 10.3390/genes13010017

Figure 11.

Figure 11

Absolute number of quantitative trait loci (QTL) by class overlapping with the top 0.001% markers for yearling temperament in American Angus cattle using the single-step GWAS fitting only haplotypes or non-clustered SNPs and haplotypes. ssGWAS_H0.15, ssGWAS_H0.50, and ssGWAS_H0.80: ssGWAS using only haplotypes from blocks with linkage disequilibrium (LD) thresholds of 0.15, 0.50, and 0.80, respectively; ssGWAS_NCSNP_H0.15, ssGWAS_NCSNP_H0.50, and ssGWAS_NCSNP_H0.80: ssGWAS using non-clustered SNPs and haplotypes from blocks with LD thresholds of 0.15, 0.50, and 0.80, respectively.