Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2021 Aug 18;16(2):423–434. doi: 10.1038/s41396-021-01082-x

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

PMC Copyright notice

Fig. 5 — A Each point shows proportion of codons with dN/dS values < 1 (purifying selection) within a single accessory gene. Genes are categorised based on their stress response (z-score, based on occurrence along the stress gradient; n = 3000 genes, 1000 per category). Genes with small or no responses to stress (z-score ~ 0) overall have a lower proportion of codons under purifying selection (p < 0.001; Table S5). B Points show the mean and 95% prediction interval for the proportion of genes with any codons with dN/dS values > 1 (positive selection), plotted by each occurrence response category, based on a binomial model. Accessory genes with negative stress response have significantly higher proportion of genes under positive selection (p = 0.018; Table S5).