Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2022 Jan 20;12:1094. doi: 10.1038/s41598-022-05085-2

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2022

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

PMC Copyright notice

Phylogenetic tree showing 736 SARS-CoV-2 completes genomes from health care workers and patients from Bichat Claude-Bernard and Pitié-Salpêtrière hospitals, Paris, France, over the year 2020. The maximum likelihood phylogenetic tree was inferred from the alignment of the 736 reconstructed full SARS-CoV-2 genomes and 2932 worldwide sequences extracted from GISAID database, with IQTREE v2.0 with a GTR + G nucleotide substitution model, 1000 ultrafast bootstrap replicates and using Wuhan Hu-1 genome (NC_045512.2) as an outgroup. For greater clarity, 2932 worldwide representative sequences extracted from GISAID database were masked from the phylogenetic tree representation.