Table 2.
Normalized but gene copy number.
| Cluster | Copy number | p-value | FDR | Cliff's delta | |
|---|---|---|---|---|---|
| Omnivore | Vegan | ||||
| A | 4.0 (2.3) | 3.5 (2.0) | 0.056 | 0.337 | −0.3 |
| B | 0.20 (2.25) | 0.44 (5.09) | 0.135 | 0.404 | −0.2 |
| C | 190 (310) | 211 (243) | 0.289 | 0.432 | −0.1 |
| D | 31 (111) | 63 (118) | 0.360 | 0.432 | 0.1 |
| E | 0.48 (0.55) | 0.28 (0.48) | 0.269 | 0.432 | 0.1 |
| F | 22 (40) | 12 (25) | 0.647 | 0.647 | 0.1 |
Data are given as median (interquartile range). The copy number of the but gene was normalized to spike DNA (C. elegans UNC-6 gene) and calculated using the ΔCt method. Clusters represent groups of bacteria sharing sufficient but gene similarity allowing for the use of one degenerate primer pair. Bacteria belonging to individual clusters are listed in Supplementary Table 9.