Table 1. Comparisons among different sequenced pear genomes.
Contigs | ‘Dangshansuli’ | Bartlettv1.0 | BartlettDHv2.0 | ‘Shanxi Duli’ | ‘Zhongai 1’ |
---|---|---|---|---|---|
Number of contigs | 25,312 | 182,196 | 620 | 595 | 1241 |
Total size of contigs (Mb) | 501.3 | 507.7 | 501 | 497 | 510.6 |
N50 contig length (kb) | 35.7 | 6.6 | 5300 | 1571.5 | 1277.3 |
Longest contig (Mb) | 0.3 | 0.1 | / | / | 6.5 |
Scaffolds | |||||
Number of scaffolds | 2,103 | 142083 | 592 | 139 | 784 |
Total size of scaffolds (Mb) | 512 | 577.3 | 496.9 | 532.7 | 510.6 |
N50 scaffold length (kb) | 540.8 | 88.1 | 6500 | 28122.4 | 23450 |
Longest scaffold (Mb) | 4.1 | 1.2 | / | 45.5 | 31.9 |
Anchored size to the chromosome (Mb) | 386.7 | 171.3 | 445.1 | 500 | 506.3 |
Anchored rate to the chromosome (%) | 75.5 | 29.7 | 84.2 | 94 | 99.2 |