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TABLE 1.

Oligonucleotides used for DNA PCR and RT-PCR

PCR primer Sequence (5′ → 3′) Nucleotide position Fragment size (bp)
EAV F1 GCTGTTCTTCATGTGCGAAG 1624–1643a 352
EAV R1 CAGTGGACGCGGTATCAACAGTAA 1975–1951a
EAV F2 GTTCCGGGATTCTTTACAACTG 1654–1675a 276
EAV R2 CAGACGAGGCTCCAGCGTGAAGTC 1929–1906a
ALV 21F TGTGTGGATTGACCAGTGG 2789–2807b 301
ALV 21R CGCAAGAGGAATAGAAAAGAAG 3068–3089b
ALV P1 CCTGTCTTTGTGATCCGG 2904–2921b 159
RSV R1 CTTGAGGTCTAAGACCATCAG 3062–3042c
CRE F1 GACTGGATGAGTACAAGTCTTC 2997–3018d 393
CRE R1 CAAGTCCAGGTAAATGACATC 3389–3409d
CRE F2 GTCAGGCGAGGTCCCAGATGAC 3109–3130d 268
CRE R2 CTCATCCACCAACGCCGTCAC 3376–3356d
MNP1 GGTTCGGATGGTTCGAGAACA 428–448e 477
MNP2 GGTTCATCAAGGACTCAAGTG 884–904e
MNP3 TGAAGTGCAAGACCCTGAGGG 465–485e 400
MNP4 TTCATGCAGTCCAAGAGCAGG 844–864e
a

From reference 10

b

Based upon endogenous ALV sequences in CEF cells (37). 

c

GenBank accession no. J02342, J02021, and J02343 (32). 

d

GenBank accession no. U88211 (13). 

e

From reference 12