| CCM | Central Carbon Metabolism |
| ODE | Ordinary Differential Equation |
| FAIR | Findability, Accessibility, Interoperability, and Reuse |
| TCA | TriCarboxylic Acid |
| GP | Glucose Perturbation |
| PPP | Pentose Phosphate Pathway |
| SS | Steady State |
| FF | Feast–Famine |
| HXK | Hexokinase |
| PYK | Pyruvate Kinase |
| FBP | Fructose-1,6-bis-phosphate |
| PFK | Phosphofructokinase |
| PKA | Protein Kinase A |
| PTM | Post-Translational Modification |
| GLT | Glucose Transporter |
| O2 | Oxygen |
| CO2 | Carbon Dioxide |
| GAPDH | Glyceraldehyde 3-phosphate dehydrogenase |
| NMR | Nuclear Magnetic Resonance |
| MS | Mass Spectroscopy |
| MLE | Maximum Likelihood Estimation |
| CFD | Computational Fluid Dynamics |
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