Table 4.
Overview of genome assembly and gene statistics for Emericellopsis cladophorae MUM 19.33 and E. atlantica TS7. AA: auxiliary activity; CBM: carbohydrate binding modules; CE: carbohydrate esterases; GH: glycoside hydrolases; GT glycosyltransferases; PL: polysaccharide lyases; NRPS: non-ribosomal peptide synthases; PKs: polyketide synthases.
|
E. cladophorae MUM 19.33 |
E. atlantica TS7 | ||
|---|---|---|---|
| Genome assembled | 26.9 Mb | 27.3 Mb | |
| Coverage | 130 | 225.6 | |
| GC content | 54.34% | 54.2% | |
| Number of genes | 8572 | 9964 | |
| Average genes length | 1546 bp | 1832 bp | |
| Genes encoding CAZymes | 407 | 396 | |
| AA | 72 | 53 | |
| CBM | 8 | 40 | |
| CE | 28 | 21 | |
| GH | 200 | 217 | |
| GT | 83 | 93 | |
| PL | 16 | 17 | |
| BGCs | 37 | 35 | |
| NRPS | 10 | 8 | |
| NRPS-like | 7 | 6 | |
| PKs | 6 | 6 | |
| NRPS-PKs | 5 | 3 | |
| NRPS-like-PKs | 1 | 0 | |
| NRPS-PKs-hybrid | 0 | 1 | |
| Terpenes | 7 | 9 | |
| Indole | 0 | 1 | |
| Phosphonate | 1 | 1 |