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. 2021 Nov 2;92(2):313–322. doi: 10.1097/TA.0000000000003450

TABLE 1.

Platelet RNA Abundance in Trauma Patients Compared With Healthy Donors

Gene Gene Name Fold Change* p FDR
MYL4 Myosin light chain 4 5.82 3.53 × 10−5 0.01
AC093809.1 Mitochondrially encoded cytochrome C oxidase III pseudogene 5.74 9.64 × 10−5 0.03
AGGF1P10 Angiogenic factor with G-patch and FHA domains 1 pseudogene 10 5.22 9.78 × 10−5 0.03
REEP1 Receptor accessory protein 1 −3.65 2.12 × 10−4 0.04
AC109635.3 Pantothenate kinase 3 pseudogene 3.32 1.17 × 10−4 0.03
FBXO48 F-Box protein 48 3.22 1.96 × 10−4 0.04
IL6STP1 interleukin 6 signal transducer pseudogene 1 2.99 2.31 × 10−5 0.01
MTATP8P1 Mitochondrially encoded ATP synthase 8 pseudogene 1 2.86 1.37 × 10−5 0.01
MTND5P11 Mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 pseudogene 11 2.84 2.53 × 10−8 0.00
MTND6P4 Mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 pseudogene 4 2.67 1.01 × 10−6 0.00
AC107954.1 Capping protein (actin filament) muscle Z-line, alpha 2 2.61 7.45 × 10−5 0.02
SEPTIN7P3 Septin 7 pseudogene 3 2.53 1.12 × 10−4 0.03
H3P1 H3 histone pseudogene 1 2.44 2.53 × 10−5 0.01
MTND4LP30 Mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4L pseudogene 30 2.41 2.44 × 10−5 0.01
MTATP8P2 Mitochondrially encoded ATP synthase 8 pseudogene 2 2.39 6.96 × 10−6 0.01
FTH1P3 Ferritin, heavy polypeptide 1 pseudogene 3 2.32 3.55 × 10−5 0.01
RN7SL3 RNA component of signal recognition particle 7SL3 2.32 2.48 × 10−5 0.01
MTND4P12 Mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 pseudogene 12 2.25 2.56 × 10−7 0.00
NAP1L1P1 Nucleosome assembly protein 1-like 1 pseudogene 1 2.23 2.00 × 10−6 0.00
MTRNR2L8 Humanin-like 8 2.13 8.27 × 10−5 0.02
PCNPP5 PEST containing nuclear protein pseudogene 5 2.12 1.40 × 10−5 0.01
MTCO3P12 Mitochondrially encoded cytochrome c oxidase III pseudogene 12 2.11 1.84 × 10−6 0.00
NOMO2 NODAL modulator 2 2.07 1.26 × 10−4 0.03
AP000763.2 Mitochondrially encoded cytochrome c oxidase I pseudogene 2.07 9.22 × 10−6 0.01
MTCO1P40 Mitochondrially encoded cytochrome c oxidase I pseudogene 40 2.03 8.90 × 10−6 0.01
MTCYBP18 Mitochondrially encoded cytochrome b pseudogene 18 1.98 9.12 × 10−5 0.03
OVCH1-AS1 OVCH1 antisense RNA 1 1.92 2.64 × 10−6 0.00
FTH1P5 Ferritin, heavy polypeptide 1 pseudogene 5 1.91 5.61 × 10−5 0.02
YWHAZP5 Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide pseudogene 1.88 2.02 × 10−5 0.01
ATF4P3 Activating transcription factor 4C 1.87 2.73 × 10−5 0.01
MTCO2P12 Mitochondrially encoded cytochrome c oxidase II pseudogene 12 1.82 2.62 × 10−5 0.01
NDUFA4 NADH-ubiquinone oxidoreductase MLRQ subunit 1.81 5.39 × 10−6 0.01
FUNDC1 FUN14 domain-containing protein 1 1.76 1.04 × 10−4 0.03
H3P47 H3 histone pseudogene 47 1.72 2.20 × 10−4 0.04
TLK1P1 Tousled like kinase 1 pseudogene 1 1.72 4.31 × 10−5 0.02
FTH1P8 Ferritin, heavy polypeptide 1 pseudogene 8 1.67 1.36 × 10−5 0.01
H3P16 H3 histone pseudogene 16 1.66 6.08 × 10−5 0.02
TTC1 Tetratricopeptide repeat domain 1 1.63 9.52 × 10−6 0.01
FTH1P23 Ferritin, heavy polypeptide 1 pseudogene 23 1.63 3.83 × 10−5 0.01
FTH1P16 Ferritin heavy chain 1 pseudogene 16 1.57 1.55 × 10−4 0.04
CCNYL1 Cyclin Y like 1 1.55 1.72 × 10−4 0.04
ITGB3BP Integrin subunit beta 3 binding protein 1.54 1.68 × 10−4 0.04
DNAJC3 DnaJ heat shock protein family (Hsp40) member C3 1.54 2.76 × 10−5 0.01
SNN Stannin −1.48 2.30 × 10−4 0.04
AC113404.3 RAP1B like (pseudogene) 1.48 1.21 × 10−5 0.01
AC084824.2 Nucleosome assembly protein 1-like 1 (NAP1L1) pseudogene 1.48 2.08 × 10−4 0.04
FTH1P11 Ferritin heavy chain 1 pseudogene 11 1.47 9.91 × 10−5 0.03
ROCK2 Rho associated coiled-coil containing protein kinase 2 0.89 5.74 × 10−5 0.02
RIT1 Ras like without CAAX 1 0.89 1.46 × 10−4 0.03

Fold change (log2); Gene names for protein-coding RNA transcripts are those maintained by the HUGO Gene Nomenclature Committee. Noncoding RNA transcripts are given names from miRBase and Rfam (an EMBLservice).46,47