Table 2. Simple sequence repeats (SSRs) in the genome of Hoplolaimus galeatus identified using the bioinformatic workflow Pal_finder v0.02.04.08 as implemented in the Galaxy platform ( https://palfinder.ls.manchester.ac.uk).
| Forward primer name | Forward primer sequence | Reverse primer name | Reverse primer sequence | Motifs(bases) |
|---|---|---|---|---|
| galeatus_Forward_01 | TGCATCTTGTACATGCCACG | galeatus_Reverse_01 | GGCACGTTCAACAAGGACC | TGC(15) |
| galeatus_Forward_02 | CAATATCAAAGAGAATTTTGATCACTACC | galeatus_Reverse_02 | GGACCTCCCAGTTTCAATGC | ATT(15) |
| galeatus_Forward_03 | AGAGGGCTGGAGAAACATGG | galeatus_Reverse_03 | TTACGCTTTCGCTGTTCTCG | TCC(15) |
| galeatus_Forward_04 | TCAAGCCACGGTACAACAGC | galeatus_Reverse_04 | GCTCAAATTCCTCCATTCGC | AAC(24) |
| galeatus_Forward_05 | ATTCCTTTTCTCAAAATTTCACG | galeatus_Reverse_05 | TGTCATTGAGTACATCGGCG | ATT(15) |
| galeatus_Forward_06 | TCCGGAAAATGTTTGCATCC | galeatus_Reverse_06 | CCATTTGGAGTACACGCTCG | ACC(15) |
| galeatus_Forward_07 | GCGATAGACGATCAAAGCCC | galeatus_Reverse_07 | CCTTCAGTTCACGCACATCG | CCG(15) |
| galeatus_Forward_08 | GAAGAACCATTTGGGGAGCC | galeatus_Reverse_08 | AAAACAATGGTGGTCCGGC | AAT(15) |
| galeatus_Forward_09 | GAGGGTTTTAGAGGGTGGGG | galeatus_Reverse_09 | AGGGGTGAAGCAGGAGAACG | AAC(15) |
| galeatus_Forward_10 | TCGTCGTTTTGTTTGTTCGG | galeatus_Reverse_10 | GAAGGTACGGAAAGGGAGGG | TCC(15) |
| galeatus_Forward_11 | ACAACGCCTCGACATCAGC | galeatus_Reverse_11 | CGGATACCACCAGCCTCTAGC | CGG(15) |
| galeatus_Forward_12 | GGCGAGATTTTCACTTTCTGC | galeatus_Reverse_12 | GCATTCGGGACTATCCAACC | ATC(15) |
| galeatus_Forward_13 | ATGGAGGATTACCAAGGCCC | galeatus_Reverse_13 | GCGATATCTTCCCGTATGCC | AAC(15) |
| galeatus_Forward_14 | TAGTTGGGCCGACTGACC | galeatus_Reverse_14 | TCTTCTCTTCTGCCTCACCC | TC(14) |
| galeatus_Forward_15 | CATATTTGGTGTGTTGGGGC | galeatus_Reverse_15 | AAATCTATCCGCACTTTTCCG | TC(12) |
| galeatus_Forward_16 | GGGAATGAGTGCTCCAAAGC | galeatus_Reverse_16 | CGTATTCGAATTCATGCACCC | TC(12) |
| galeatus_Forward_17 | ACCCATTCATTTCTCTCGCC | galeatus_Reverse_17 | TGGCCAAGTCTTTCTCTCCC | TC(12) |
| galeatus_Forward_18 | GAATGACAGAGAGAGGCAGGG | galeatus_Reverse_18 | TCACTTGCTCTCTGAATTTCTTGG | TC(14) |
| galeatus_Forward_19 | GAAGATAGTGAGAGACTGAGAAATGG | galeatus_Reverse_19 | CTCGCTTTCCTCTTCCTGC | TC(22) |
| galeatus_Forward_20 | CAAACCAATTGTAATCAGATGATCC | galeatus_Reverse_20 | AAACAGTCAAATGGCTGGGG | TC(12) |
| galeatus_Forward_21 | TTTCCAAAACCTCTGGTGCC | galeatus_Reverse_21 | AGAATTACCGAATCGCGACC | TG(14) |
| galeatus_Forward_22 | TTCTTACCCTCTGCGCTTCG | galeatus_Reverse_22 | CAATCCTCAGCACTCCCACC | TG(12) |
| galeatus_Forward_23 | GTTCGAGATCAGCTGGCAGG | galeatus_Reverse_23 | AACTAGCCCCTGGCACACC | CG(12) |
| galeatus_Forward_24 | ATCTCCGGATTCAAAGCAGC | galeatus_Reverse_24 | AAATTCGCAATGAGCATCCC | TC(16) |
| galeatus_Forward_25 | CGTTTGGAAGGTTCATTTCAGC | galeatus_Reverse_25 | TCGGGGTTGTAGGAGTTTGG | TC(12) |
| galeatus_Forward_26 | TTCTTCAGCGTTCATCTCCG | galeatus_Reverse_26 | GGGATGATGAGTAAAGCGGC | TC(44) |
| galeatus_Forward_27 | GAGAGAGAAAGACGGAGCGG | galeatus_Reverse_27 | AGTGCCCAATACATGAGCCC | TC(14) |
| galeatus_Forward_28 | ATGCGGATTCTCTGGCTCC | galeatus_Reverse_28 | AAGACAAGTGATCCAGCAGACG | TC(14) |
| galeatus_Forward_29 | CTCTGACTGTATGCCGTCGC | galeatus_Reverse_29 | GTGAAAATGAGAGATGGCCG | TC(12) |
| galeatus_Forward_30 | AGGACGACATAATGGGTCGG | galeatus_Reverse_30 | TCTTCCTCCAGCTAGCAGCC | TC(14) |
| galeatus_Forward_31 | TCGCTCTATCTCTCGTGCCC | galeatus_Reverse_31 | ACATAATATCGCTCACACGATGC | TC(14) |
| galeatus_Forward_32 | GAAGAAGGGGTGGGAATGG | galeatus_Reverse_32 | ACGACATGTGCGTTTTGTCC | TC(16) |
| galeatus_Forward_33 | CCAGCCACTACCAGGAGACC | galeatus_Reverse_33 | GATGAATAACTCGCGCACCC | TC(12) |
| galeatus_Forward_34 | TTGGCCTGTCTTCTATTTCACC | galeatus_Reverse_34 | TCATTACACAACGTGGCCG | TC(12) |
| galeatus_Forward_35 | CTCCTTGTCCCTGCCTATGG | galeatus_Reverse_35 | GGCGCTGCTTACACTTATTGC | TG(12) |
| galeatus_Forward_36 | AACCTTTCTCTTATACACATTTTCTATCC | galeatus_Reverse_36 | TGACTATTAAACACATCTAATGCTACCG | TG(12) |