| Reverse vaccinology |
NERVE |
http://www.bio.unipd.it/molbinfo/
|
| Vaxign |
http://www.violinet.org/vaxign/
|
| VaxiJen |
http://www.ddg-pharmfac.net/vaxijen/VaxiJen/VaxiJen.html
|
| VacSol |
https://sourceforge.net/projects/vacsol/
|
| MHC I—CTL Epitope prediction |
EpiJen |
http://www.ddg-pharmfac.net/epijen/EpiJen/EpiJen.htm
|
| MHCPred |
http://www.ddg-pharmfac.net/mhcpred/MHCPred
|
| NetMHC 4.0 Server |
https://services.healthtech.dtu.dk/service.php?NetMHC-4.0
|
| NetCTL 1.2 Server |
http://www.cbs.dtu.dk/services/NetCTL/
|
| NetCTLPan-1.1 |
https://services.healthtech.dtu.dk/service.php?NetCTLpan-1.1
|
| IEDB Analysis Resource |
http://tools.iedb.org/mhci/
|
| MHC II—B Cell Epitope prediction |
NetMHCIIpan 4.0 Server |
https://services.healthtech.dtu.dk/service.php?NetMHCIIpan-4.0/
|
| NeonMHC2 |
neonmhc2.org
|
| NetMHCII 2.3 Server |
http://www.cbs.dtu.dk/services/NetMHCII/
|
| BepiPred-2.0 |
https://services.healthtech.dtu.dk/service.php?BepiPred-2.0
|
| DiscoTope 2.0 Server |
https://services.healthtech.dtu.dk/service.php?DiscoTope-2.0
|
| ABCpred |
https://webs.iiitd.edu.in/raghava/abcpred/ABC_submission.html
|
| COBEpro |
http://scratch.proteomics.ics.uci.edu/
|
| MHC I—MHC II Epitope prediction |
SYFPEITHI |
http://www.syfpeithi.de/bin/MHCServer.dll/EpitopePrediction.htm
|
| NetMHCpan 4.1 |
https://services.healthtech.dtu.dk/service.php?NetMHCpan-4.1/
|
| EpiVax |
https://epivax.com
|
| Structural vaccinology |
Phyre2 server |
http://www.sbg.bio.ic.ac.uk/phyre2/html/page.cgi?id=index
|
| GalaxyWEB server |
http://galaxy.seoklab.org/
|
| SWISS-MODEL |
https://swissmodel.expasy.org
|
| GalaxyRefine2 |
http://galaxy.seoklab.org/cgi-bin/submit.cgi?type=REFINE2
|
| MolProbity |
http://molprobity.manchester.ac.uk
|
| ProSA |
https://prosa.services.came.sbg.ac.at/prosa.php
|
| Saves |
https://saves.mbi.ucla.edu/
|
| PatchDock |
https://bioinfo3d.cs.tau.ac.il/PatchDock/php.php
|
| Autodock Vina |
http://vina.scripps.edu/
|
