Table 1. Total number of sequencing reads obtained from each sample.
| Sample name | Total Reads | Mapped Reads | Uniq Mapped Reads | Multiple Map Reads |
|---|---|---|---|---|
| CL1 | 40,918,904 | 35,153,610(85.91%) | 34,569,539(84.48%) | 584,071(1.43%) |
| CL2 | 47,888,734 | 41,180,289(85.99%) | 40,468,518(84.51%) | 711,771(1.49%) |
| CL3 | 45,846,222 | 39,494,069(86.14%) | 38,830,063(84.70%) | 664,006(1.45%) |
| CR1 | 39,610,692 | 33,168,267(83.74%) | 32,547,312(82.17%) | 620,955(1.57%) |
| CR2 | 40,630,974 | 33,601,548(82.70%) | 32,933,270(81.05%) | 668,278(1.64%) |
| CR3 | 43,169,994 | 34,980,971(81.03%) | 34,327,845(79.52%) | 653,126(1.51%) |
| WL1 | 39,464,384 | 33,934,945(85.99%) | 33,361,618(84.54%) | 573,327(1.45%) |
| WL2 | 40,027,610 | 34,443,486(86.05%) | 33,897,841(84.69%) | 545,645(1.36%) |
| WL3 | 41,557,772 | 35,653,680(85.79%) | 35,037,818(84.31%) | 615,862(1.48%) |
| WR1 | 40,983,672 | 32,810,482(80.06%) | 32,218,760(78.61%) | 591,722(1.44%) |
| WR2 | 47,124,748 | 37,432,143(79.43% | 36,741,146(77.97% | 690,997(1.47%) |
| WR3 | 42,694,908 | 34,396,57(80.56%) | 33,762,811(79.08%) | 633,346(1.48%) |
Note: CL: leaves under nonwaterlogged conditions; CR: roots under nonwaterlogged conditions; WL: leaves under waterlogged conditions; WR: roots under waterlogged conditions.