Table 1.
The physicochemical properties of CUC sequences in S. spontaneum and Arabidopsis thaliana
| Name | Gene ID | A | B | C | Amino acid length (aa) | MW (kDa) | Isoelectric point | Chromosome position | |
|---|---|---|---|---|---|---|---|---|---|
| 1 | SsCUC2 | Sspon.07G0020380-1A | 0 | 4 | 2 | 401 | 42.251 | 8.76 | Chr7A:75915862-75918375 |
| 2 | SsCUC2 | Sspon.07G0020380-2C | 0 | 4 | 2 | 400 | 42.107 | 8.9 | Chr7C:70928956-70931222 |
| 3 | SsCUC2 | Sspon.07G0020380-3D | 0 | 4 | 3 | 397 | 41.452 | 9.03 | Chr7D:67919120-67921641 |
| 4 | SsCUC3 | Sspon.06g0001780-1A | 1 | 3 | 0 | 331 | 36.215 | 7.22 | Chr6A:5729607-5731660 |
| 5 | SsCUC3 | Sspon.06g0001780-2B | 1 | 3 | 0 | 311 | 34.198 | 8.52 | Chr6B:3987180-3989885 |
| 6 | AtCUC1 | AT3G15170 | 3 | 4 | 1 | 310 | 34.232 | 8.58 | Chr3:5109782-5111608 |
| 7 | AtCUC2 | AT5G53950 | 3 | 5 | 2 | 375 | 41.434 | 8.52 | Chr5:21901704-21903854 |
| 8 | AtCUC3 | AT1G76420 | 3 | 3 | 3 | 334 | 38.017 | 6.46 | Chr1:28671806-28674045 |
note:
‘A’ represents the number of N-Glycosylation site
‘B’ represents the number of Protein kinase C phosphorylation site in the NAM domain of the protein
‘C’ represents the number of Protein kinase C phosphorylation site outside the NAM domain of the protein
Alleles are labeled with –nX, where n represents alleles and X indicates haplotype ID, ranging from A to D