Table 1. The information of samples used in this study.
ID | Species | Class | Type | PTPC | BTPC | PEPCase superfamily | Data resources |
---|---|---|---|---|---|---|---|
Spm | Spirogloea muscicola | Algae | C3 | 3 | 2 | 4 | Figshare |
Mp | Marchantia polymorpha | Bryophytes | C3 | 1 | 1 | 1 | EnsemblPlants |
Pp | Physcomitrella patens | Bryophytes | C3 | 22 | 0 | 10 | EnsemblPlants |
Aa | Anthoceros angustus | Bryophytes | C3 | 1 | 1 | 2 | Dryad |
Sm | Selaginella moellendorffii | Lycopods | C3 | 4 | 4 | 0 | EnsemblPlants |
Is | Isoetes sinensis | Lycopods | CAM | 2 | 5 | 0 | This study |
Af | Azolla filiculoides | Ferns | C3 | 2 | 0 | 3 | Fernbase |
Pb | Platycerium bifurcatum | Ferns | CAM | 2 | 0 | 2 | GigaDB |
Pa | Picea abies | Gymnosperms | C3 | 0 | 0 | 10 | Congenie |
Gm | Gnetum montanum | Gymnosperms | C3 | 1 | 1 | 0 | Dryad |
Amt | Amborella trichopoda | Angiosperms | C3 | 1 | 1 | 0 | EnsemblPlants |
Ac | Ananas comosus | Angiosperms | CAM | 2 | 0 | 1 | EnsemblPlants |
Os | Oryza sativa | Angiosperms | C3 | 9 | 1 | 4 | EnsemblPlants |
Zm | Zea mays | Angiosperms | C4 | 22 | 1 | 33 | EnsemblPlants |
At | Arabidopsis thaliana | Angiosperms | C3 | 8 | 1 | 0 | EnsemblPlants |
Ah | Amaranthus hypochondriacus | Angiosperms | C4 | 3 | 0 | 0 | Phytozome |
Kf | Kalanchoe fedtschenkoi | Angiosperms | CAM | 8 | 1 | 0 | Phytozome |
Notes.
- PTPC
- plant-type PEPC
- BTPC
- bacterial-type PEPC