REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
Cy3 AffiniPure Goat Anti-Human IgG (H+L) | Jackson ImmunoResearch | Cat# 109-165-003; RRID: AB_2337718 |
Cy3 AffiniPure Goat Anti-Rabbit IgG (H+L) | Jackson ImmunoResearch | Cat# 111-165-003; RRID: AB_2338000 |
Polyclonal Rabbit Anti-Human IgG/HRP antibody | Agilent | Cat# P021402-2; RRID: AB_2893418 |
Polyclonal Rabbit Anti-Human IgM/HRP antibody | Agilent | Cat# P021502-2; RRID: AB_2893505 |
Goat Anti-Rabbit IgG (H+L)-HRP Conjugate antibody | Bio-Rad | Cat# 172-1019; RRID: AB_11125143 |
Bacterial and virus strains | ||
BoDV-1, 2 strains isolated from human CNS tissue | Institute of Clinical Microbiology and Hygiene, University Hospital Regensburg, Germany | N/A |
Biological samples | ||
Plasma samples of 2 BoDV-1 infected rabbits. The animal experiments were evaluated and approved by the ethics committee of the State Office of Agriculture, Food safety, and Fishery in Mecklenburg – Western Pomerania (LALLF M-V: LVL MV/TSD/ 7221.3-2-010/18). | Institute of Diagnostic Virology, Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Greifswald – Insel Riems, Germany | N/A |
Plasma samples of VSBV-1 infected rabbits. The animal experiments were evaluated and approved by the ethics committee of the State Office of Agriculture, Food safety, and Fishery in Mecklenburg – Western Pomerania (LALLF M-V: LVL MV/TSD/ 7221.3-2-010/18). | Institute of Diagnostic Virology, Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Greifswald – Insel Riems, Germany | N/A |
Chemicals, peptides, and recombinant proteins | ||
BoDV-1 nucleocapsid Np40 protein, His-tagged | Mikrogen | N/A |
BoDV-1 phosphoprotein Pp23, His-tagged | Mikrogen | N/A |
BoDV-1 X protein Xp10, GST-tagged | Mikrogen | N/A |
PBS | GIBCO | Cat# 14190-094 |
Tween 20 | Caelo | Cat# 3472 |
Fat free milk powder | Heirler | N/A |
RF Absorbent | Virion/Serion | Cat# Z200 |
Mikrogen TMB | Mikrogen | Cat# 12003 |
Mikrogen Stopp (24.9% H3PO4) | Mikrogen | Cat# 12004 |
TRIS buffer with Tween 20, pH 8.0 | Sigma-Aldrich | Cat# T9039-10PAK |
TaqPath™1-Step RT-qPCR Master Mix, CG | Applied Biosystems | Cat# A15299 |
NxtScript Reaction Mix | Roche/Penzberg | Cat# 07368372103 |
NxtScript RT 85U/μL | Roche/Penzberg | Cat# 07371527103 |
ROX-Reference Dye | Life technologies | Cat# 12223-012 |
RNase free DEPC water | Roth | Cat# 143.3 |
PageRuler Prestained Protein Ladder | Thermo Fisher Scientific | Cat# 26617 |
Roti-Block | Roth | Cat# A151.2 |
Critical commercial assays | ||
EZ1 Virus Mini Kit v2.0 | QIAGEN | Cat# 179799 |
Deposited data | ||
Dataset uploaded to Mendeley | This study | https://doi.org/10.17632/wpvkdhmgz4.1 |
Experimental models: Cell lines | ||
Vero cells | Institute of Clinical Microbiology and Hygiene, University Hospital Regensburg, Germany | N/A |
Oligonucleotides | ||
BoDV-1 Mix 1 (target: x/p gene): | Metabion; (Schlottau et al.2) | N/A |
• BoDV1-1288-F (TAGTYAGGAGGC TCAATGGCA) | ||
• BoDV-1-1449-R (GTCCYTCAGGA GCTGGTC) | ||
• BoDV-1-1346-FAM (FAM-AAGAAG ATCCCCAGACACTACGACG-BHQ1) | ||
BoDV-1 Mix 6 (target: m/g gene): | Metabion; (Schlottau et al.2) | N/A |
• BoDV-1-2262-F (CAATYAATGCAG CYTTCAATGTCTT) | ||
• BoDV-1-2336-R (GAATGTCYGGG CCGAGAG) | ||
• BoDV-1-2316-FAM (FAM-CCARCA CCAATGTTCCGAAGCCG-BHQ1) | ||
MS2: | Metabion; | N/A |
• MS2 forward primer | Metabion; | |
• MS2 reverse primer | Applied Biosystems; | |
• MS2 So VIC/Tamra | (Dreier et al., 2005) | |
Software and algorithms | ||
GraphPad Prism V9.2.0 | GraphPad | https://www.graphpad.com |
Other | ||
Nunc Maxisorp Plates | Thermo Fisher Scientific | Cat# 446469 |
μ-Plate 96 Well Black | Ibidi | Cat# 89626 |
Nitrocellulose western blotting membrane Amersham Protran Premium 0.2 μm | Thermo Fisher Scientific | Cat# 15279794 |