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. 2022 Jan 18;3(1):100499. doi: 10.1016/j.xcrm.2021.100499
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Cy3 AffiniPure Goat Anti-Human IgG (H+L) Jackson ImmunoResearch Cat# 109-165-003; RRID: AB_2337718
Cy3 AffiniPure Goat Anti-Rabbit IgG (H+L) Jackson ImmunoResearch Cat# 111-165-003; RRID: AB_2338000
Polyclonal Rabbit Anti-Human IgG/HRP antibody Agilent Cat# P021402-2; RRID: AB_2893418
Polyclonal Rabbit Anti-Human IgM/HRP antibody Agilent Cat# P021502-2; RRID: AB_2893505
Goat Anti-Rabbit IgG (H+L)-HRP Conjugate antibody Bio-Rad Cat# 172-1019; RRID: AB_11125143

Bacterial and virus strains

BoDV-1, 2 strains isolated from human CNS tissue Institute of Clinical Microbiology and Hygiene, University Hospital Regensburg, Germany N/A

Biological samples

Plasma samples of 2 BoDV-1 infected rabbits. The animal experiments were evaluated and approved by the ethics committee of the State Office of Agriculture, Food safety, and Fishery in Mecklenburg – Western Pomerania (LALLF M-V: LVL MV/TSD/ 7221.3-2-010/18). Institute of Diagnostic Virology, Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Greifswald – Insel Riems, Germany N/A
Plasma samples of VSBV-1 infected rabbits. The animal experiments were evaluated and approved by the ethics committee of the State Office of Agriculture, Food safety, and Fishery in Mecklenburg – Western Pomerania (LALLF M-V: LVL MV/TSD/ 7221.3-2-010/18). Institute of Diagnostic Virology, Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Greifswald – Insel Riems, Germany N/A

Chemicals, peptides, and recombinant proteins

BoDV-1 nucleocapsid Np40 protein, His-tagged Mikrogen N/A
BoDV-1 phosphoprotein Pp23, His-tagged Mikrogen N/A
BoDV-1 X protein Xp10, GST-tagged Mikrogen N/A
PBS GIBCO Cat# 14190-094
Tween 20 Caelo Cat# 3472
Fat free milk powder Heirler N/A
RF Absorbent Virion/Serion Cat# Z200
Mikrogen TMB Mikrogen Cat# 12003
Mikrogen Stopp (24.9% H3PO4) Mikrogen Cat# 12004
TRIS buffer with Tween 20, pH 8.0 Sigma-Aldrich Cat# T9039-10PAK
TaqPath™1-Step RT-qPCR Master Mix, CG Applied Biosystems Cat# A15299
NxtScript Reaction Mix Roche/Penzberg Cat# 07368372103
NxtScript RT 85U/μL Roche/Penzberg Cat# 07371527103
ROX-Reference Dye Life technologies Cat# 12223-012
RNase free DEPC water Roth Cat# 143.3
PageRuler Prestained Protein Ladder Thermo Fisher Scientific Cat# 26617
Roti-Block Roth Cat# A151.2

Critical commercial assays

EZ1 Virus Mini Kit v2.0 QIAGEN Cat# 179799

Deposited data

Dataset uploaded to Mendeley This study https://doi.org/10.17632/wpvkdhmgz4.1

Experimental models: Cell lines

Vero cells Institute of Clinical Microbiology and Hygiene, University Hospital Regensburg, Germany N/A

Oligonucleotides

BoDV-1 Mix 1 (target: x/p gene): Metabion; (Schlottau et al.2) N/A
• BoDV1-1288-F (TAGTYAGGAGGC
TCAATGGCA)
• BoDV-1-1449-R (GTCCYTCAGGA
GCTGGTC)
• BoDV-1-1346-FAM (FAM-AAGAAG
ATCCCCAGACACTACGACG-BHQ1)
BoDV-1 Mix 6 (target: m/g gene): Metabion; (Schlottau et al.2) N/A
• BoDV-1-2262-F (CAATYAATGCAG
CYTTCAATGTCTT)
• BoDV-1-2336-R (GAATGTCYGGG
CCGAGAG)
• BoDV-1-2316-FAM (FAM-CCARCA
CCAATGTTCCGAAGCCG-BHQ1)
MS2: Metabion; N/A
• MS2 forward primer Metabion;
• MS2 reverse primer Applied Biosystems;
• MS2 So VIC/Tamra (Dreier et al., 2005)

Software and algorithms

GraphPad Prism V9.2.0 GraphPad https://www.graphpad.com

Other

Nunc Maxisorp Plates Thermo Fisher Scientific Cat# 446469
μ-Plate 96 Well Black Ibidi Cat# 89626
Nitrocellulose western blotting membrane Amersham Protran Premium 0.2 μm Thermo Fisher Scientific Cat# 15279794