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. 2022 Jan 24;23:11. doi: 10.1186/s13059-021-02582-x

Table 4.

S. dysgalactiae assembly statistics for enriched and control channels

Enrich S. dysgalactiae (channels 1–256)
Time (hours) 1 1.5 2 3 4 5 6
Reads 2066 3669 3810 5648 7385 8984 10,467
Total read length 22,620,532 41,656,686 41,901,525 60,708,472 78,890,074 94,518,641 108,992,425
Contigs 2 1 1 1 1 1 1
Total contig length 2,117,919 2,079,393 2,079,362 2,079,466 2,079,521 2,079,533 2,079,512
Contig N50 2,111,978 2,079,393 2,079,362 2,079,466 2,079,521 2,079,533 2,079,512
Longest contig 2,111,978 2,079,393 2,079,362 2,079,466 2,079,521 2,079,533 2,079,512
Aligned bases in ref 99.98% 100.00% 100.00% 100.00% 100.00% 100.00% 100.00%
Assembly time 00:05:31 00:09:00 00:08:47 00:11:39 00:14:43 00:17:19 00:19:20
Control (channels 257–512)
Time (hours) 1 Not performed 2 3 4 5 6
Reads 466 902 1406 1797 2216 2609
Total read length 6,021,205 11,113,179 17,840,666 22,769,997 28,302,443 32,833,051
Contigs 3 8 7 5 5 6
Total contig length 600,309 1,705,413 2,242,365 2,610,844 2,703,245 2,772,594
Contig N50 442,714 315,659 1,691,837 2,100,413 2,077,669 2,079,314
Longest contig 442,714 616,463 1,691,837 2,100,413 2,077,669 2,079,314
Aligned bases in ref 32.05% 80.47% 98.06% 99.73% 99.88% 100.00%
Assembly time 00:02:13 00:03:23 00:04:34 00:05:47 00:06:32 00:07:07