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. 2022 Jan 24;23:11. doi: 10.1186/s13059-021-02582-x

Table 7.

The top 5 defined genomes determined by MetaMaps classification of the first 100,000 compost reads. Of the first 100,000 reads, 72,638 were long enough (> 1kb) for MetaMaps classification. Also shown are the number of contigs and total size of contigs mapping to the genome

Species Reads per first 100k
(72,638 > 1kb)
Abundance % (based on mapped reads > 1kb) Number of contigs Total length of contigs
Hydrogenophaga sp. PBC 1183 1.63 17 3,982,409
Pseudoxanthomonas suwonensis 600 0.83 34 3,552,404
Thauera humireducens 403 0.55 19 2,280,334
Sphingopyxis granuli 330 0.45 19 3,534,465
Devosia sp. A16 307 0.43 9 804,967