Table 7.
The top 5 defined genomes determined by MetaMaps classification of the first 100,000 compost reads. Of the first 100,000 reads, 72,638 were long enough (> 1kb) for MetaMaps classification. Also shown are the number of contigs and total size of contigs mapping to the genome
Species | Reads per first 100k (72,638 > 1kb) |
Abundance % (based on mapped reads > 1kb) | Number of contigs | Total length of contigs |
---|---|---|---|---|
Hydrogenophaga sp. PBC | 1183 | 1.63 | 17 | 3,982,409 |
Pseudoxanthomonas suwonensis | 600 | 0.83 | 34 | 3,552,404 |
Thauera humireducens | 403 | 0.55 | 19 | 2,280,334 |
Sphingopyxis granuli | 330 | 0.45 | 19 | 3,534,465 |
Devosia sp. A16 | 307 | 0.43 | 9 | 804,967 |