TABLE 1.
Single amplified genomes (SAGs) and metagenome-assembled genomes (MAGs) identified as GAL08 recovered in this study.
Speciesa | Type | Assembly size (Mbp) | Est. completeness %b | Est. Size (Mbp)b | Qualityb | Est. contamination (%)b | IMG Taxon ID |
Species 1 | MAG | 3.08 | 95.3 | 3.23 | High | 2.56 | 3300025105_19 |
MAG | 3.09 | 95.3 | 3.24 | High | 3.42 | 3300025775_16 | |
MAG | 3.05 | 93.3 | 3.28 | High | 2.56 | 3300006767 | |
SAG | 3.04 | 92.7 | 3.28 | High | 2.56 | 3300013894 | |
SAG | 2.75 | 89.3 | 3.08 | Medium | 1.71 | 3300014485 | |
MAG | 2.90 | 89.3 | 3.24 | Medium | 1.71 | 3300025094_20 | |
SAG | 2.39 | 74.6 | 3.20 | Medium | 2.56 | 2616644824 | |
SAG | 1.93 | 63.4 | 2.92 | Medium | 0.85 | 3300014036 | |
SAG | 1.39 | 44.0 | 3.15 | Low | 0 | 3300022998 | |
SAG | 1.23 | 36.5 | 3.36 | Low | 0 | 2634166204 | |
SAG | 1.03 | 33.7 | 3.04 | Low | 0 | 3300010608 | |
7 more SAGsa | <30% | ||||||
Species 2 | MAG | 2.50 | 69.7 | 3.08 | Medium | 5.87 | 3300006767 |
SAG | 2.50 | 85.3 | 2.94 | Medium | 2.56 | 2706794759 | |
SAG | 2.47 | 75.9 | 3.25 | Medium | 2.75 | 3300014484 | |
SAG | 2.23 | 70.6 | 3.16 | Medium | 2.56 | 3300014483 | |
SAG | 0.78 | 30.2 | 2.60 | Low | 0.85 | 3300014433 | |
Species 3 | MAG | 3.28 | 96.6 | 3.39 | High | 2.56 | 3300025105_14 |
SAG | 2.14 | 63.6 | 3.35 | Medium | 0.85 | 2706794767 | |
SAG | 1.80 | 62.5 | 3.15 | Medium | 0.85 | 3300014343 | |
MAG | 2.01 | 56.4 | 3.57 | Medium | 0.85 | 3300025094_36 | |
SAG | 1.38 | 47.5 | 2.89 | Low | 0 | 3300014464 | |
SAG | 1.87 | 46.3 | 4.03 | Low | 0 | 2619618948 | |
SAG | 1.18 | 34.3 | 3.43 | Low | 0 | 3300010653 | |
2 more SAGsb | <30% |
Grouping of SAGs into species was made based on average nucleotide identity (ANI) comparisons (Figure 3). Completeness and contamination were estimated using CheckM (Parks et al., 2015). Quality was assessed as described by Bowers et al. (2017).
aIMG Taxon IDs: 3300013081, 3300010584, 3300010538, 3300010583, 3300014406, 2619618940, and 3300022972.
bIMG Taxon IDs: 3300014405 and 3300014434.