TABLE 3.
Circadian rhythm- and hormone signal transduction-related enriched genes.
| Pathway | Gene number | Comparison (Log2 fold change) |
Function annotation | ||
| Stage 1_ stage2 | Stage2_stage3 | Stage3_stage4 | |||
| Circadian rhythm | Sobic.003G017200 | NA | 3.24
|
5.67
|
FTL1 |
| Sobic.006G128500 | –2.94
|
NA | 3.00
|
FTL6 | |
| Sobic.010G045100 | –2.94
|
NA | 3.00
|
FTL2 | |
| Sobic.002G262500 | NA | NA | 2.25
|
FTL4 | |
| Sobic.001G087100 | NA | NA | –1.35
|
Phytochrome C | |
| Sobic.004G312600 | 1.44
|
NA | 1.32
|
COP1 | |
| Sobic.009G238000 | 1.32
|
NA | 1.17
|
Suppressor of phytochrome A | |
| Hormone signal transduction | Sobic.001G259900 | –6.35
|
6.87
|
–8.13
|
Jasmonate-zim-domain protein 1 |
| Sobic.006G056400 | –5.15
|
4.10
|
–2.39
|
Jasmonate-zim-domain protein 10 (JAZ10) | |
| Sobic.001G259600 | –3.73
|
4.70
|
–5.04
|
Jasmonate-zim-domain protein 11 (JAZ11) | |
, down-regulated; , up-regulated.