Table 1.
Assembly statistics of the Ilex polyneura genome based on PacBio and Hi-C sequencing
| Assembly feature | Value |
|---|---|
| Assembly size (bp) | 718 958 801 |
| GC content (%) | 36.08 |
| Total contig length (bp) | 727 102 167 |
| Number of contigs | 483 |
| Contig N50 size (bp) | 5 124 369 |
| Contig N90 size (bp) | 575 529 |
| Longest contig length (bp) | 23 338 240 |
| Total scaffolds length (bp) | 727 144 267 |
| Number of scaffolds | 62 |
| Scaffold N50 size (bp) | 36 593 620 |
| Scaffold N90 size (bp) | 25 719 167 |
| Longest scaffold length (bp) | 64 863 080 |
| Gap (%) | 3.10 |
| Repeat region % of assembly | 57.62 |
| BUSCO | C:97.6%[S:90.2%,D:7.4%],F:0.9%,M:1.5%,n:1614* |
*C: Complete BUSCO, S: Complete and single-copy BUSCO, D: Complete duplicated BUSCO, F: Fragmented BUSCO, M: Missing BUSCO, and n: Total BUSCO groups searched.