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. 2021 Dec 21;50(2):704–716. doi: 10.1093/nar/gkab1236

Figure 3.

Figure 3.

Cell-cycle stage inference from real datasets. (A) shows seven multiclass classification metrics to evaluate the cell cycle classification accuracy of CCPE, cyclone, Seurat, reCAT, Cyclum and CYCLOPS for mESCs Quartz-Seq data. (B) shows seven multiclass classification metrics to evaluate the cell cycle classification accuracy of CCPE, cyclone, Seurat, reCAT, Cyclum and CYCLOPS for E-MTAB-2805 mESCs data. Details of all the clustering measurements are provided in Supplementary Text S4. (C) Boxplots of RI, NMI and Accuracy values indicate the performance of CCPE and Cyclum on the subsampled datasets with smaller number of genes. (D) Boxplots of RI, NMI and Accuracy show the cell cycle classification accuracy of CCPE and Cyclum on the subsampled datasets with different numbers of cells.