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. 2022 Jan 26;23:37. doi: 10.1186/s13059-021-02583-w

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© The Author(s) 2022

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 5 — Speed comparisons for simulated and real datasets. “Sim1” corresponds to a simulated single-cell dataset with 40 cells and 4753 SNVs. “Sim2” corresponds to a simulated dataset with 100 cells and 9935 SNVs. “Sim3” corresponds to a simulated dataset with 60 cells and 9982 SNVs. “Sim4” corresponds to a simulated dataset with 40 cells and 3986. “Sim6-100” corresponds to a simulated dataset with 100 cells and 1000 SNVs. “Sim6-500” corresponds to a simulated dataset with 500 cells and 1000 SNVs. CRC24 and L86 correspond to two empirical datasets (see the “Methods” section). Note the logarithmic time scale on the y-axis