TABLE 1.

Sequencing yield, trimming, and mapping statistics.

Sample ID*	Sequenced reads (M)	Reads after trimming (M)	Mapped (%)**
GpDS1	93.18	83.83	91.05%
GpDS2	92.42	83.10	91.10%
GpDS3	96.04	87.30	86.68%
GpSSI1	92.59	86.01	90.56%
GpSSI2	90.81	81.24	90.05%
GpSSI3	98.10	87.89	89.10%
GpINN1	88.99	79.82	90.94%
GpINN2	112.65	100.67	90.30%
GpINN3	132.58	119.10	89.61%
GeDS1	92.76	84.01	80.46%
GeDS2	94.51	85.36	80.60%
GeDS3	95.35	85.80	80.14%
GeSSI1	88.48	79.54	80.57%
GeSSI2	94.10	85.10	80.45%
GeSSI3	93.45	84.27	80.33%
GeINN1	94.89	85.51	80.13%
GeINN2	96.64	87.58	80.30%
GeINN3	93.65	84.51	80.71%

*Gp, Globodera pallida; Ge, Globodera ellingtonae; DS, susceptible potato variety cv. Desirée; SSI, immune plant S. sisymbriifolium; INN, resistant potato variety cv. innovator.

**% of trimmed reads mapped to G. pallida genome (G. pallida reads) and G. rostochiensis genome (G. ellingtonae reads).