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. 2022 Jan 27;18(1):e1009711. doi: 10.1371/journal.pcbi.1009711

Table 1. Schedule of the 2-week course.

WEEK 1 MONDAY TUESDAY WEDNESDAY THURSDAY FRIDAY
09:00 Lecture Practicals Lecture Practicals Independent study time
10:00 CBM Introducing COBRA methods with simple CBM models Large-scale modelling and omics data integration Large-scale modelling and omics data integration with rFASTCORMICS
11:00
12:00
12:30
13:00 Practicals Practicals Practicals Practicals Report writing (Assignment 1)
14:00 Introducing COBRA methods with simple CBM models Introducing COBRA methods with simple CBM models Large-scale modelling and omics data integration with rFASTCORMICS Large-scale modelling and omics data integration with rFASTCORMICS
15:00
16:00 Project preparation
WEEK 2 MONDAY TUESDAY WEDNESDAY THURSDAY FRIDAY
09:00 Independent study time Project-based practicals Project-based practicals Project-based practicals Final project presentations (Assignment 3)
10:00
11:00
12:00
12:30
13:00 Project pitches (Assignment 2) Project-based practicals Project-based practicals Project-based practicals
14:00
15:00
16:00

Lectures, guided practical, and PBL times are depicted in blue, pink, and green, respectively. There are 3 assignments (in yellow) contributing to the final grading: a report on the guided practical of week 1, due on Monday after the course ending; a project pitch; and a final project presentation, both evaluated jointly by the students and the teachers. Allocated time for the presentations per student (7 to 15 minutes) is adapted according to the overall number of students. Independent study time is planned to allow the students to prepare for the assignments.

CBM, constraint-based modelling; PBL, project-based learning.