Table 1. Schedule of the 2-week course.
WEEK 1 | MONDAY | TUESDAY | WEDNESDAY | THURSDAY | FRIDAY |
09:00 | Lecture | Practicals | Lecture | Practicals | Independent study time |
10:00 | CBM | Introducing COBRA methods with simple CBM models | Large-scale modelling and omics data integration | Large-scale modelling and omics data integration with rFASTCORMICS | |
11:00 | |||||
12:00 | |||||
12:30 | |||||
13:00 | Practicals | Practicals | Practicals | Practicals | Report writing (Assignment 1) |
14:00 | Introducing COBRA methods with simple CBM models | Introducing COBRA methods with simple CBM models | Large-scale modelling and omics data integration with rFASTCORMICS | Large-scale modelling and omics data integration with rFASTCORMICS | |
15:00 | |||||
16:00 | Project preparation | ||||
WEEK 2 | MONDAY | TUESDAY | WEDNESDAY | THURSDAY | FRIDAY |
09:00 | Independent study time | Project-based practicals | Project-based practicals | Project-based practicals | Final project presentations (Assignment 3) |
10:00 | |||||
11:00 | |||||
12:00 | |||||
12:30 | |||||
13:00 | Project pitches (Assignment 2) | Project-based practicals | Project-based practicals | Project-based practicals | |
14:00 | |||||
15:00 | |||||
16:00 |
Lectures, guided practical, and PBL times are depicted in blue, pink, and green, respectively. There are 3 assignments (in yellow) contributing to the final grading: a report on the guided practical of week 1, due on Monday after the course ending; a project pitch; and a final project presentation, both evaluated jointly by the students and the teachers. Allocated time for the presentations per student (7 to 15 minutes) is adapted according to the overall number of students. Independent study time is planned to allow the students to prepare for the assignments.
CBM, constraint-based modelling; PBL, project-based learning.