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. 2022 Jan 28;33(2):571–600. doi: 10.1007/s11224-021-01871-2

Table 8.

Properties of H-bond interaction between top 3 docking poses of DKC derivative and exemestane, anastrazole, and letrozole with PDB ID: 3S79

Molecule ID Interacting amino acid Interacting protein atom Interaction energy (Kcal/mol Å) Interaction distance in Å Interacting ligand atom H-bond donor
DKC-1 Arg 403 NH2 −2.11469 2.81011 O(15) Arg 403
NH2 −0.680609 3.20804 O(13) Arg 403
Tyr 366 O −2.5 2.60305 O(15) Ligand
Gln 367 NE2 −2.5 2.77063 O(13) Gln367
Met 68 O −1.95123 2.53415 O(24) Ligand
Ser 72 OG −0.709929 3.45801 O(24) Ligand
His 475 N −2.5 3.0684 O(22) His 475
DKC-10 Arg 79 NH1 −1.50535 3.29893 O(12) Arg 79
Arg 400 NH1 −1.98122 3.20376 O(12) Arg 400
Ser 72 O −2.5 3.05591 O(51) Ser 72
Lys 473 O −0.866787 3.32424 N(48) Ligand
N −2.5 2.82116 O(20) Lys 473
Trp 67 NE1 −0.515552 2.60534 O(62) Tyr 67
DKC-20 Lys 243 N −1.0294 3.39412 O(24) Target Lys 243
Tyr 244 OH −2.5 2.98727 O(24) Both
OH −2.5 2.69089 O(25) Both
Pro 481 O −0.416259 2.34995 O(42) Ligand
His 480 NE2 −2.5 2.70549 O(42) Ligand
Arg 192 NH2 −0.734587 3.33627 O(43) Target Arg 192
Glu 483 OE1 −2.5 2.92788 O(43) Ligand
DKC-21 Arg 192 NH2 −0.189517 3.35792 O(22) Target Arg 192
Gln 218 NE2 −1.78868 3.24226 O(22) Target Gln 218
NE2 −2.19014 3.16197 O(17) Target Gln 218
Glu 483 OE1 −1.49575 3.30085 O(22) Ligand
Tyr 244 OH −2.5 3.09962 O(33) Target Tyr 244
Lys 230 N −1.69385 3.26123 O(33) Lys 230
Try 67 O −1.31209 3.33785 O(38) Ligand
Leu 66 O −1.7352 3.25396 O(38) Ligand
Anastrozole Gln 428 NE2 −2.5 3.0995 N(8) Gln 428
Tyr 424 N −1.22505 2.83501 N(21) Tyr 424
Exemestane Arg 403 NE −0.687485 2.83446 O(18) Arg 403
NH2 −0.322524 3.32084 O(18) Arg 403
Lys 473 N −1.84649 3.19827 O(20) Lys 473
Letrozole Val 422 N −2.5 3.09893 N(6) Val 422
Lys 440 N −2.5 3.09986 N(2) Lys 440
Gln 428 NE2 −2.49168 3.10166 N(2) Gln 428