Table 2.

Relative abundance of genera in JoCo participants with (cases) and without (controls) knee plus hand OA

Taxon name	ALL		CASES		CONTROLS
	mean	SD	mean	SD	mean	SD	ES(P)	Q
k_Bacteria.p_Cyanobacteria.c_4C0d.2.o_YS2.f_.g_	2.64E–03	1.24E–02	5.17E–04	1.96E–03	5.17E–03	1.80E–02	0.33 (0.001)	0.13
k_Bacteria.p_Firmicutes.c_Clostridia.o_Clostridiales. f_Christensenellaceae.g_Christensenella	3.00E–05	6.21E–05	1.71E–05	4.83E–05	4.53E–05	7.30E–05	0.26 (0.01)	0.56
k_Bacteria.p_Lentisphaerae.c_.Lentisphaeria.o_Victivallales. f_Victivallaceae.g_	9.57E–04	4.86E–03	4.84E–04	1.70E–03	1.52E–03	6.96E–03	0.23 (0.03)	0.68
k_Bacteria.p_Firmicutes.c_Clostridia.o_Clostridiales. f_Eubacteriaceae.g_Anaerofustis	3.01E–05	6.74E–05	2.52E–05	5.85E–05	3.58E–05	7.70E–05	0.20 (0.06)	0.68
k_Bacteria.p_Synergistetes.c_Synergistia.o_Synergistales. f_Dethiosulfovibrionaceae.g_Pyramidobacter	1.24E–03	8.19E–03	1.43E–03	9.99E–03	1.02E–03	5.42E–03	0.20 (0.06)	0.68
k_Bacteria.p_Proteobacteria.c_Gammaproteobacteria. o_Enterobacteriales.f_Enterobacteriaceae.Other	1.12E–04	2.74E–04	6.81E–05	1.48E–04	1.64E–04	3.68E–04	0.19 (0.07)	0.68
k_Bacteria.p_Firmicutes.c_Clostridia.o_Clostridiales. f_Peptococcaceae.g_rc4.4	1.74E–04	6.22E–04	5.04E–05	1.34E–04	3.20E–04	8.92E–04	0.19 (0.07)	0.68
k_Bacteria.p_Proteobacteria.c_Gammaproteobacteria. o_Pasteurellales.f_Pasteurellaceae.g_Haemophilus	1.08E–03	3.98E–03	1.28E–03	4.93E–03	8.50E–04	2.44E–03	0.19 (0.07)	0.68
k_Bacteria.p_Firmicutes.c_Clostridia.o_Clostridiales. f_Lachnospiraceae.g_Roseburia	1.30E–03	1.51E–03	1.09E–03	1.39E–03	1.54E–04	1.63E–03	0.18 (0.08)	0.68
k_Bacteria.p_Firmicutes.c_Clostridia.o_Clostridiales. f_Lachnospiraceae.g_Dorea	5.78E–03	7.71E–03	5.55E–03	8.36E–03	6.06E–04	6.94E–03	0.18 (0.08)	0.68

P, p-values from the non-parametric Wilcoxon test; ES, effect size; Q, false discovery rate adjusted p-values; SD, standard deviation