Table 3 |.
Microscopy methods
Modalities | Resolution (XY) | Resolution (Z) | Illumination | Probes | Acquisition time | Post-acquisition processing | Live or fixed |
---|---|---|---|---|---|---|---|
Standard fluorescence microscopy | 250 nm | 500 nm | Epi, confocal, TIRF | Conventional fluorescent probes | Seconds | Live, fixed | |
SIM, airyscan | 80 nm–150 nm | 250 nm–350 nm | Widefield (epi and TIRF) | Conventional fluorescent probes | Seconds | Yes, FTT | Live, fixed |
STED | 30 nm–80 nm | 150 nm | Laser scanning | Limited selection of probes (match depletion laser) | Seconds | No | Live, fixed; optimal for fixed |
Cryo-soft X-ray tomography | 25 nm–40 nm | 30 nm | Widefield | none | No | Fixed (near-native state vitrification) | |
PALM | 20 nm | 50 nm | Widefield (epi and TIRF) | Photoactivatible fluorescent proteins | Minutes | Yes (PSF mapping) | Live, fixed |
STORM | 20 nm | 50 nm | Widefield (epi and TIRF) | Photoswitchable dyes | Minutes | Yes (PSF mapping) | Live, fixed |
LLSM | 100 nm–200 nm | 400 nm | Multi-Bessel beam plane illumination | Conventional fluorescent probes | Seconds, minutes or hours | Not necessary, but often tracking dynamic processes | Live, fixed; optimal for live |
TEM | <1 nm | 70 nma | Electron beam | Contrast reagent, immunochemistry | Seconds | Yes | Fixed |
CLEM | <1 nm/150 nmb | 5 nmc | Electron beam, widefield | Contrast reagent, nanodots, and fluorescent proteins | Minutes | Yes (aligning) | Live and/or fixed |
Characteristics of imaging methods used to visualize EVs. epi, epifluorescence; FTT, fast Fourier transform; PSF, point spread function; TEM, transmission electron microscopy.
Resolution corresponding to the thickness of the section.
Resolution gap between electron microscopy and light microscopy data, respectively.
Tomography from double-tilted 250 nm sections.