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. 2020 Aug;9(8):4847–4856. doi: 10.21037/tcr-20-322

Table 2. Type, AF and mutation sites of TP53 gene and NOTCH1 gene in 13 patients.

Patient number Gene Mutation type AF, % Mutation site
N03 TP53 Missense 8.00 TP53:c.338T>G(p.Phe113Cys)
TP53 Stop_gained 4.30 TP53:c.637C>T(p.Arg213*)
TP53 Missense 3.50 TP53:c.659A>G(p.Tyr220Cys)
NOTCH1 Missense 8.10 NOTCH1:c.293G>T(p.Cys98Phe)
NOTCH1 Missense 2.70 NOTCH1:c.1348G>A(p.Glu450Lys)
NOTCH1 Inframe_ deletion 2.00 NOTCH1:c.1138_1140delCCC(p.Pro380del)
N04 TP53 Missense 24.50 TP53:c.518T>G(p.Val173Gly)
NOTCH1 Missense 2.90 NOTCH1:c.1120G>T(p.Asp374Tyr)
NOTCH1 Missense 3.10 NOTCH1:c.1348G>A(p.Glu450Lys)
N05 TP53 Missense 11.80 TP53:c.701A>G(p.Tyr234Cys)
N06 TP53 Missense 2.70 TP53:c.641A>G(p.His214Arg)
N09 TP53 Stop_ gained 2.20 TP53:c.574C>T(p.Gln192*)
TP53 Missense 1.10 TP53:c.742C>T(p.Arg248Trp)
TP53 Frameshift_variant 18.60 TP53:c.516dupT(p.Val173fs)
NOTCH1 Disruptive Inframe_ deletion 26.40 NOTCH1:c.1070_1072delTCT(p.Phe357del)
N10 TP53 Missense 63.70 TP53:c.743G>A(p.Arg248Gln)
NOTCH1 Missense 78.50 NOTCH1:c.1366T>A(p.Cys456Ser)
NOTCH1 Missense 77.20 NOTCH1:c.1365G>T(p.Glu455Asp)
N11 TP53 Missense 6.00 TP53:c.396G>T(p.Lys132Asn)
NOTCH1 Frameshift_variant 8.00 NOTCH1:c.1952_1958delACTCGGG(p.Asp651fs)
N12 NOTCH1 Missense 2.40 NOTCH1:c.1093C>T(p.Arg365Cys)

Frameshift_variant: insertion or deletion causes a frame shift. Missense: variant causes a codon that produces a different amino acid. Stop_gained: variant causes a STOP codon (nonsense_variant). Inframe_deletion: one or many codons are deleted. Disruptive inframe_deletion: one codon is changed and one or more codons are deleted. AF, allele frequency.