Table 3. GO and pathway analysis for genes in subnetwork 1.
| Category | Term | Count | P value |
|---|---|---|---|
| GOTERM_CC_DIRECT | GO:0005654-nucleoplasm | 6 | 1.71×10−2 |
| GOTERM_CC_DIRECT | GO:0000139-Golgi membrane | 3 | 4.76×10−2 |
| GOTERM_MF_DIRECT | GO:0005515-protein binding | 11 | 8.43×10−3 |
| GOTERM_MF_DIRECT | GO:0003677-DNA binding | 6 | 2.64×10−3 |
| GOTERM_MF_DIRECT | GO:0042802-identical protein binding | 5 | 9.88×10−4 |
| GOTERM_MF_DIRECT | GO:0019899-enzyme binding | 3 | 1.89×10−2 |
| GOTERM_MF_DIRECT | GO:0001077-transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding | 3 | 9.85×10−3 |
| GOTERM_BP_DIRECT | GO:0060333-interferon-gamma-mediated signaling pathway | 6 | 5.30×10−10 |
| GOTERM_BP_DIRECT | GO:0060337-type I interferon signaling pathway | 5 | 6.21×10−8 |
| GOTERM_BP_DIRECT | GO:0045893-positive regulation of transcription, DNA-templated | 5 | 2.43×10−4 |
| GOTERM_BP_DIRECT | GO:0006955-immune response | 4 | 2.22×10−3 |
| GOTERM_BP_DIRECT | GO:0006366-transcription from RNA polymerase II promoter | 4 | 3.89×10−3 |
| KEGG_PATHWAY | hsa05203:Viral carcinogenesis | 5 | 8.43×10−5 |
| KEGG_PATHWAY | hsa05168:Herpes simplex infection | 4 | 1.36×10−3 |
| KEGG_PATHWAY | hsa04914:Progesterone-mediated oocyte maturation | 3 | 5.33×10−3 |
| KEGG_PATHWAY | hsa04114:Oocyte meiosis | 3 | 8.26×10−3 |
| KEGG_PATHWAY | hsa05200:Pathways in cancer | 3 | 8.91×10−3 |
Top five GO terms in diversetables and major pathways are listed. Count, number of DEGs; GO,gene ontology; DEGs, differentially expressed genes; MF, molecular function; BP, biological process; CC, cellular component; KEGG, KyotoEncyclopedia of Genes and Genomes.