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. 2022 Jan 7;25(2):103751. doi: 10.1016/j.isci.2022.103751
REAGENT SOURCE IDENTIFIER
Antibodies

Anti SNAP23 Synaptic System 111–213; RRID:AB_10805651
Anti SNAP23 Synaptic System 111–202; RRID:AB_887788
Anti KCC2 (D1R2R) Cell Signaling Technology 94725; RRID:AB_2800232
Anti-KCC2 [N1/12] Abcam Cat# ab134300
Anti Syntaxin 1A Synaptic Systems 110–111; RRID:AB_887848
Anti FLAG Genscript A 00187; RRID:AB_1720813
Anti Transferrin receptor Thermofisher scientific 13–6800; RRID:AB_2533029
β-Actin MP Biomedicals Cat# 0869100
β-Tubulin Santa Cruz Biotechnology sc5274; RRID:AB_2288090

Chemicals, Peptides and recombinant proteins

Dulbecco's Modified Eagle's Medium (DMEM) Biological Industries 01-055-1A
Fetal Calf Serum Biological Industries 04-001-1A
pen-strep Biological Industries 03-031-1B
L-Glutamine Biological Industries 03-020-1B
Zinc sulfate heptahydrate Sigma- Aldrich z4750
BCECF-AM Tef Labs Not available
BSA MP Biomedicals 216006980
TransIT-X2 mirusbio MIR 6000
DIOA
2-[(2-butyl-6,7-dichloro-2-cyclopentyl-1-oxo-3H-inden-5-yl)oxy]acetic acid
Sigma-Aldrich D129
Bumetanide
3-(butylamino)-4-phenoxy-5-sulfamoylbenzoic acid
Sigma-Aldrich B3023
Staurosporine Santa Cruz Biotechnology sc3510A
Go6983
3-[1-[3-(dimethylamino)propyl]-5-methoxyindol-3-yl]-4-(1H-indol-3-yl)pyrrole-2,5-dione
Sigma-Aldrich G1918
BAY11-7085 (E)-3-(4-tert-butylphenyl)sulfonylprop-2-enenitrile APExBio B3033
VU0463271
N-cyclopropyl-N-(4-methyl-1,3-thiazol-2-yl)-2-(6-phenylpyridazin-3-yl)sulfanylacetamide
Tocris 4719
Iodoacetamide
2-iodoacetamide
Sigma-Aldrich I6125
Protease inhibitor cocktail A2S K1007
Papain
2-[[2-[[2-[(2-aminoacetyl)amino]acetyl]amino] -3-(4-hydroxyphenyl)propanoyl]amino]-5-(diaminomethylideneamino)pentanoic acid
Worthington LS033126
Hanks' balanced salts solution Biological Industries 02-015-1B
HEPES
2-[4-(2-hydroxyethyl)piperazin-1-yl]ethanesulfonic acid
Biological Industries 03-025-1C
poly-D-lysine Sigma-Aldrich p0899
Neurobasal medium GIBCO 21103049
Fetal Bovine Serum HyClone sh30070.03
B-27 GIBCO 17504044
Glutamax-100X GIBCO 35050038
Gentamicin Biological Industries 03-035-1C
Veriblot IP detection reagent Abcam ab131366; RRID:AB_2892718
protein A magbeads GenScript L00273
qPCR bio probe blue mix PCR biosystem pb20.25-05
Cytosine β-D-arabinofuranoside (AraC) Sigma- Aldrich c6645
SNAP23 blocking peptide GRKKRRQRRRPQMDDLSPEEIQLRAHQVTDSEQ GenScript USA Inc
SCR blocking peptide GRKKRRQRRRPQGFAESLFQSIEKESGFSCG GenScript USA Inc

Critical commercial assays

Bio-Rad protein assay Bio-Rad 5000006
Q5 Site-Directed Mutagenesis Kit New England Biolabs E0554S
EZ-Link Sulfo-NHS-Biotinylation Kit Pierce Biotechnology, Thermoscientific PIR-89881
Duolink in situ red starter kit SigmaAldrich DU092101
PureLink™ RNA Mini Kit Invitrogene 12183018a
cDNA synthesis kit Quanta bio 95047

Experimental models: Cell lines

HEK293 ATCC CRL-1573
SHSY-5Y ATCC CRL-2266

Experimental models: Organisms/strains

C57BL/6JRccHsd mice Envigo 043

Oligonucleotides

siGPR39 5′-CCAUGGAGUUCUACAGCAU-3′ Sigma- Aldrich
siSNAP23 5′-CCAACAGAGAUCGUAUUGA-3′ Integrated DNA Technologies, IDT
siKCC2 5′-CAAACAGAUGCAUUUAACCAAGAAT-3′ Integrated DNA Technologies, IDT
SCR 5'-GCCCAGAUCCCUGUACGU-3′ Sigma- Aldrich
KCC2 S940A 5′-GTCACGAGGCGCAATCCGGAG-3′ 5′-TCATCTGTGATACTCTGGATCTC-3′
KCC2 S988A 5′-CAGCTCCCCGGCCCCAGGGGA-3′ 5′-CTGGGGCAGCTGGGAGCACTC-3′
KCC2 S986A 5′-CCCCAGCAGCGCCCCGTCCCC-3′ 5′-CAGCTGGGAGCACTCTGATCGTGG-3′
KCC2 T584A 5′-GCTGCTGAGGGCACCCAACTG-3′ 5′-GTCTGCACTGCACAGGCC-3′
KCC2 T906E 5′-CTATGAGAAGGAGTTGGTGATGGAG-3′ 5′-GTGTAAGCTGAGATGTCG-3′
KCC2 T1007E 5′-GGTGCATCTCGAGTGGACCAAGGACAAG-3′ 5′-TTCTCCGGATCTGTCTCC-3′
KCC2 S868A 5′-GGATGACAATGCCATCCAGATGAAGAAG-3′ 5′-ATCTGGGCCACAGTGAAG-3′
SPVSS 5′-GAGGGCATCAAGGACTTC-3′ 5′-GGGGCCCTTATTCTTCTC-3′
ΔNCD-KCC2 5′-ATGGGCGTGTACCTGCCG-3′ 5′-TTTATCATCATCATCTTTATAA
TCCATAGCCGAATTC-3′
ΔCTD-KCC2 5′-TGCTCTAGAGCATCATATC
CCATCGCCCCACTCC-3′
SNAP23 S95/120A 5′-GAACTTTGAGGCTGGAAAGAAC-3′ 5′-TTTGTCCTATTACAAGGG-3′

5′-TAAGCAACCGGCCCGGATTACAAATG-3′ 5′-GATACTACATTGCTAGGTG-3′

Recombinant DNA

human KCC2 cDNA Prof. Gamba
mouse SNAP23 OriGene MR202271
Human GPR39 OriGene- with mcherry addition and deletion of FLAG-MYC www.origene.com/catalog/cdna-clones/expression-plasmids/rc219212/gpr39-nm_001508-human-tagged-orf-clone