Antibodies |
|
Anti-human Fc specific antibody |
Sigma-Aldrich |
I1886; RRID:AB_260125 |
Polyclonal alkaline phosphatase-conjugated anti-human Fc antibody produced in goat |
Sigma-Aldrich |
A9544; RRID:AB_258459 |
monoclonal horseradish peroxidase-conjugated anti-GST antibody produced in goat |
Rockland |
600-103-200; RRID:AB_218192 |
|
Chemicals, peptides, and recombinant proteins |
|
Human FcRn |
In-house |
NA |
Recombinant human IL-12 |
PeproTech |
200-12 |
Mouse epidermal growth factor (BD |
ThermoFisher |
PMG8043 |
MES |
Sigma-Aldrich |
M3671 |
NaCl |
Sigma-Aldrich |
S9888 |
Tris/HCl |
Sigma-Aldrich |
T3253 |
Na2HPO4x2H2O, |
Sigma-Aldrich |
71645 |
NaH2PO4xH2O |
Sigma-Aldrich |
S9638 |
3,3′5,5′-tetramethylbenzine substrate |
Merck |
CL07 |
Tween-20 |
Sigma-Aldrich |
P1379 |
Skimmed milk |
ITW reagents |
A0830 |
phosphate-buffered saline |
Sigma-Aldrich |
D8537 |
Hydrocortisone |
Sigma-Aldrich |
H0888 |
G418 |
ThermoFisher |
10131027 |
Blasticidin S |
ThermoFisher |
A1113903 |
Alkaline phosphatase substrate |
Sigma-Aldrich |
S0942 |
K3-EDTA |
Sigma-Aldrich |
03664 |
cOmplete protease inhibitor cocktail |
Roche |
11836145001 |
NT-647-HNS fluorescent dye |
Nanotemper technologies |
MO-L001 |
Phosphate-buffered saline |
Sigma-Aldrich |
D8537 |
MCDB 131 medium |
Gibco |
10372019 |
RPMI medium |
Sigma-Aldrich |
R2405 |
Heat-inactivated fetal calf serum |
Sigma-Aldrich |
F7524 |
L-glutamine |
ThermoFisher |
25030123 |
Streptomycin and penicillin |
Sigma-Aldrich |
P4458 |
Hank’s Balanced salt solution |
ThermoFisher |
14025100 |
MEM non-essential amino acids |
ThermoFisher |
11140050 |
RIPA buffer |
ThermoFisher |
89900 |
Hank’s Balanced salt solution |
ThermoFisher |
14025100 |
|
Experimental models: Cell lines |
|
HEK293E |
ATCC |
CRL-1573 |
HMEC1 stably expressing HA-hFcRn-EGFP (HMEC1-hFcRn |
Weflen et al., 2013 |
Harvard Medical School and Harvard Digestive Diseases Center |
|
Experimental models: Organisms/strains |
|
Hemizygous hFcRn transgenic Tg32 mice, B6.Cg-Fcgrttm1DcrTg(FCGRT)32Dcr/DcrJ |
The Jackson Laboratory |
NA |
FcRn-deficient B6-Fcgrttm1Dcr mice |
The Jackson Laboratory |
NA |
|
Oligonucleotides |
|
Control siRNA |
Santa Cruz Biotechnology Inc. |
sc-37007 |
Mixture of three hFcRn HC-specific siRNAs |
Santa Cruz Biotechnology Inc |
sc-45632 |
|
Other |
|
ustekinumab Fab |
RCSB PDB (www.rcsb.org) |
3HMW |
briakinumab Fab |
RCSB PDB |
5N2K |
ustekinuamb-IL-12 complex |
RCSB PDB |
3HMX |
briakinumab-IL23 complex |
RCSB PDB |
5NJD |
|
Software and algorithms |
|
GraphPad Prism 7 |
GraphPad Software Inc |
https://www.graphpad.com/scientific-software/prism/ |
Jalview 2 |
Waterhouse et al., 2009 |
Jalview.org |
PyMOL |
PyMOL by Schrödinger |
Pymol.org |
Emboss iep |
Emboss |
http://www.bioinformatics.nl/cgi-bin/emboss/iep?_pref_hide_optional=0 |
pdb2pqr sever |
Dolinsky et al., 2004 |
http://nbcr-222.ucsd.edu/pdb2pqr_2.1.1/ |
|
Other |
|
24 well plates |
Costar |
10732552 |
96-well ELISA plates |
Costar |
10544522 |
CaptureSelecet™ pre-packed anti-human IgG-CH1 column |
Life technologies |
494346201 |
Amicon Ultra-15 mL 50K columns |
Millipore |
C7715 |
Superdex 200 increase 10/300 GL column |
GE Healthcare |
28–9909-44 |
Amicon Ultra-0.5 mL 100K columns |
Millipore |
UFC510096 |
SDS-PAGE |
ThermoFisher |
NW00125BOX |
MycoAlertTM PLUS Mycoplasma detection kit |
Lonza |
LT07-703 |
analytical FcRn column |
Roche |
08128057001 |
GSTrap HP column |
GE Healthcare |
17–5282-02 |
HisTrap HP column supplied with Ni2+ ions |
GE Healthcare |
17–5027-68 |