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. 2001 May;39(5):1691–1695. doi: 10.1128/JCM.39.5.1691-1695.2001

TABLE 1.

Origin and secondary typing of 25 interstate clusters identified by image analysis of IS6110-3′ RFLP patterns

Cluster no. IS6110 copy no. Origin (no. of isolates) No. of isolates analyzedb Matched by fingerprinting methoda
IS6110-3′ IS6110-5′ PGRS Spoligotyping
1  6 Arkansas (2), Michigan (1) 2 Y Y N Y
2  8 Arkansas (1), Michigan (2) 2 N N N N
3  9 Arkansas (1), California (2) 2 Y Y Y Y
4  9 Arkansas (1), Massachusetts (2) 2 Y N N NAc
5  10 Arkansas (1), Michigan (1) 2 Y N N N
6  10 Arkansas (1), Texas (1) 2 N N N Y
7  10 Arkansas (4), Massachusetts (1), Texas (11) 3 Y Y Y Y
8  10 Arkansas (1), Michigan (2), Maryland (1) 3 Y Y (2), N (1) Y (2), N (1) Y
9  11 Arkansas (1), Maryland (1) 2 N N N N
10 11 Arkansas (1), Maryland (1) 2 Y Y Y N
11 11 Arkansas (1), Michigan (1) 2 Y N N Y
12 11 Arkansas (1), Michigan (1), California (1) 3 Y (2), N (1) N Y Y
13 11 Arkansas (3), New Jersey (1) 2 Y Y Y Y
14 12 Arkansas (2), Texas (1) 2 Y N Y Y
15 12 Arkansas (2), Massachusetts (1), New York (5), California (2) 4 Y Y (3), N (1) N Y (3), N (1)
16 12 Arkansas (7), Texas (3) 2 Y Y Y Y
17 12 Arkansas (2), Michigan (1), California (4) 3 Y Y Y Y
18 12 Arkansas (1), Maryland (1), Massachusetts (1) 3 Y (2), N (1) Y (2), N (1) Y (2), N (1) Y
19 12 Arkansas (1), Texas (2) 2 Y Y Y Y
20 13 Arkansas (1), Michigan (1) 2 N N N Y
21 13 Arkansas (3), Texas (4), California (1) 3 Y Y Y Y
22 13 Arkansas (2), California (1) 2 N N N Y
23 13 Arkansas (1), California (6) 2 Y Y N Y
24 16 Arkansas (1), Texas (7) 2 N N Y Y
25 21 Arkansas (5), Texas (30), Maryland (1) 3 Y Y Y Y
a

Y, yes; N, no. Numbers in parentheses represent numbers of isolates. 

b

One isolate from each state was analyzed. 

c

NA, DNA from this cluster was not available for spoligotyping.