Table 2.
Orthologs of genes associated with a CYC–RAD–DIV–DRIF interaction
| Species | AmCYC | AmRAD | AmDIV | SlDIVlike5 (SlMYBI, Tomato fruit, see note) | DRIF Group2a (AmDRIF1) | DRIF Group2b (AmDRIF2) | DRIF Group1 (SlFSB1, tomato fruit) |
|---|---|---|---|---|---|---|---|
| Antirrhinum majus | AmCYC, AmDICH | AmRAD, AmRADlike9 | AmDIV, AmDIV-like1 | AmDIVlike10, AmDIVlike13, AmDIVlike11 | AmDRIF1, AmDRIFlike6, AmDRIFlike7 | AmDRIF2, AmDRIFlike3 | AmDRIFlike4, AmDRIFlike5 |
| Solanum lycopersicum | SlTCP7, SlTCP26 |
SlRADlike4 (FSM1), SlRADlike1 |
SlDIVlike6 | SlDIVlike5 (MYBI), SlDIVlike10 | SlDRIF1, SlDRIF3 | SlDRIF2 | SlDRIF5 (FSB1), SlDRIF4 |
| Vitis vinifera | GSVIVT01036449001 | GSVIVT01031975001 | DIVlike8 | DIVlike12, DIVlike7 | DRIFlike2 | DRIFlike1, DRIFlike3 | DRIFlike4 |
| Oryza sativa | Os03g49880 (OsTB1) | Os05g50350, Os12g33950, Os02g47744 | DIV-like3, DIV-like4, DIV-like5 | DIV-like1, DIV-like2 | DRIFlike1, DRIFlike2 | DRIFlike1, DRIFlike2 |
DRIFlike3, DRIFlike4, DRIFlike5, DRIFlike6 |
| References | [16, 102] | Additional file 1: Fig. S1, [45, 63] | Additional file 1: Figs. S1 and S4, [45, 63] | Additional file 1: Figs. S1 and S4 | Additional file 1: Fig. S3 | Additional file 1: Fig. S3 | Additional file 1: Fig. S3 |
Relationships among close homologs of SlDIVlike5 are not well-resolved beyond Solanales + Lamiales. The V. vinifera and O. sativa genes could be orthologs or close paralogs of SlDIVlike5