FIGURE 2.

The grape gene reference catalogue in the context of published research, transcriptomic datasets, and genome annotation. The researcher interface allows to submit and download data (green arrows). Here, the catalogue will be updated with the online submission of new or corrected gene families. The updated catalogue will help in the manual curation of specific gene families using Apollo. It is also meant to reflect annotation changes from updated annotation versions resulting from manual curation. Gene correspondences with the available CabSauv08 v1.1 assembly are currently provided, whilst hoping to provide correspondences to other cultivars in the future. The catalogue information will also support the different tools provided by the VitViz platform such as Gene Cards or the Conversions app. Other tools include the visualisation of gene co-expression networks or the tissue-specific expression heat maps. Gene symbols are included in the latest 12X.2 assembly V.Cost gff annotation file and will also be present in the latest PN40024 40X.v4 assembly annotation. The lower panel shows the different levels of functional validation implemented in the catalogue.