Figure EV2. H‐NS and StpA mediate silencing of the idn operon.

1. Raw IPOD and RNA polymerase ChIP‐seq (both versus input log₁₀ ratios) over the idn operon.
2. IPOD‐HR was performed in rich defined medium (RDM) supplemented with glucose and exhibits a loss of occupancy in the deletion of both hns and stpA, as well as increased RNA polymerase occupancy.
3. RNA‐seq was performed in parallel and shows log₂ fold change compared to WT of idn operon expression upon deletion of hns and stpA. (*) indicate adjusted P‐value < 0.0005 = *** (calculated using DeSeq2 as described in Methods).