Table 1.
Top 30 redundant transcripts associated with known DSA status in a t test in the n=1679 populationa
Adjusted P Value | Gene Symbol | Gene Name | Transcript Set Annotation | Transcript Expression in All Biopsy Samples n=1679 |
Transcript Expression in NR Biopsy Samples n=1012 |
||
---|---|---|---|---|---|---|---|
DSA+ (n=576) |
DSA− (n=818) |
DSA+ (n=271) |
DSA− (n=564) |
||||
<0.001 | ROBO4 | Roundabout, axon guidance receptor, homolog 4 (Drosophila) | ABMR-RAT | 747b | 590 | 617b | 580 |
<0.001 | SH2D1B | SH2 domain containing 1B | ABMR-RAT | 18b | 13 | 13b | 12 |
<0.001 | PLA1A | Phospholipase A1 member A | ABMR-RAT, GRIT | 386b | 268 | 242b | 224 |
<0.001 | SH2D1B | SH2 domain containing 1B | ABMR-RAT | 32b | 24 | 23b | 22 |
<0.001 | S1PR5 | Sphingosine-1-phosphate receptor 5 | ABMR-RAT | 23b | 20 | 19b | 19 |
<0.001 | CX3CL1 | Chemokine (C-X3-C motif) ligand 1 | ABMR-RAT | 641b | 539 | 548b | 510 |
<0.001 | ROBO4 | Roundabout, axon guidance receptor, homolog 4 (Drosophila) | ABMR-RAT | 510b | 434 | 449b | 433 |
<0.001 | TRDC | T cell receptor δ constant | ABMR-RAT | 76b | 62 | 64b | 61 |
<0.001 | LYPD5 | LY6 | ABMR-RAT | 22b | 17 | 16b | 15 |
<0.001 | COL13A1 | collagen, type XIII, alpha 1 | ABMR-RAT | 45b | 36 | 38b | 37 |
<0.001 | LYPD5 | LY6 | ABMR-RAT | 17b | 14 | 13b | 13 |
<0.001 | TRDC | T cell receptor δ constant | ABMR-RAT | 87b | 60 | 55b | 50 |
<0.001 | TRDC | T cell receptor δ constant | ABMR-RAT | 80b | 49 | 44b | 37 |
<0.001 | CXCL11 | Chemokine (C-X-C motif) ligand 11 | ABMR-RAT, GRIT | 225b | 99 | 80b | 54 |
<0.001 | COL13A1 | Collagen, type XIII, alpha 1 | ABMR-RAT | 57b | 50 | 52b | 51 |
<0.001 | CXCL11 | Chemokine (C-X-C motif) ligand 11 | ABMR-RAT, GRIT | 104b | 46 | 37b | 24 |
<0.001 | CCL4L1 | Chemokine (C-C motif) ligand 4-like 1 | ABMR-RAT | 56b | 34 | 31b | 27 |
<0.001 | FGFBP2 | Fibroblast growth factor binding protein 2 | ABMR-RAT | 64b | 46 | 40b | 37 |
<0.001 | CXCL11 | Chemokine (C-X-C motif) ligand 11 | ABMR-RAT, GRIT | 69b | 31 | 25b | 17 |
<0.001 | SH2D1B | SH2 domain containing 1B | ABMR-RAT | 36b | 29 | 28b | 27 |
<0.001 | KLRF1 | Killer cell lectin-like receptor subfamily F, member 1 | ABMR-RAT | 78b | 59 | 56b | 52 |
<0.001 | CCL4 | Chemokine (C-C motif) ligand 4 | ABMR-RAT | 162b | 95 | 83b | 67 |
<0.001 | CD160 | CD160 molecule | ABMR-RAT | 40b | 29 | 26b | 25 |
<0.001 | ROBO4 | Roundabout, axon guidance receptor, homolog 4 (Drosophila) | ABMR-RAT | 153b | 132 | 139b | 136 |
<0.001 | TRDV3 | T cell receptor δ variable 3 | ABMR-RAT | 21b | 15 | 13b | 12 |
<0.001 | NCR1 | Natural cytotoxicity triggering receptor 1 | ABMR-RAT | 12b | 10 | 9 | 9 |
<0.001 | GNLY | Granulysin | ABMR-RAT | 107b | 89 | 84b | 79 |
<0.001 | GNLY | Granulysin | ABMR-RAT | 96b | 61 | 51b | 45 |
<0.001 | GNLY | Granulysin | ABMR-RAT | 101b | 67 | 56b | 50 |
<0.001 | GBP4 | Guanylate binding protein 4 | ABMR-RAT, GRIT | 168b | 112 | 100b | 86 |
ABMR-RAT, ABMR-associated transcripts; GRIT, γ-interferon–inducible transcripts.
Total population of 1679, with 285 biopsy samples with missing DSA status, 1394 included in the analysis.
Highest expression in DSA+ versus DSA− within each category (n=1679 and n=1012).